| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1078 |
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| Symbol | |
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| ID | 5131837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1068956 |
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| End bp | 1069888 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530003 |
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| Product | degV family protein |
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| Protein accession | YP_001214536 |
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| Protein GI | 147669718 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.159069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGTAA AAATAGTTAC CGACAGCACC GTGGATTTAC TTCCGGAAAC TATAAAAGAA
CTGGGCATAA CAATAGTACC GGTATACGTA ATGTCCGGCA ATAAAACCTA CCGGGACGGG
CTGGATATAA CCCAAACCGA AATTTACAAC CGCATGCTGA CGGGTGAGCA GTTCACCACT
TCCCAGCCCA CTCCGGCTGA CTTTGCCAGC GTTTACAAAA ACCTTTCAAA AGAAACCGAC
CAGATAGTTT CCCTTATTAT GAGCGCCAAA CTATCTGGCA CCTATAATTC GGCGGTGCAG
GGGCGTGAAC TGGCAAAAAG CAGCAGCAAT ATAGAACTGA TAGATACCAA GGCTACATCC
GGGGCTTTGG GCTTGCTGGC TACACAGGCA GCCGAAATGG CAAAAATGGG TGAAAGCGCG
GGGAATATAA TTGACACTGT CAGAAACAAT ATCCCTCACG TACACATATG GGCACTACTG
GATACCGTTA AGTACGTACT AAGAAGCGGG CGTCTCAGCA GTGCATCCAA CCTTATCAGC
GGGGTTTTAA GTATCCGCCC CATGATTACC CTCAGGGAAG GCTCTCTCTG GCCTGCCAGT
ATTCACCGCA CCCGTAATAA GGGACTGGAG AAACTGGCCG AACTGGTAAA AACCAACCGT
AACGTGGAGG CAGTTCAGAT AGTCCAAAGT GTAGACCTGG CGGAAGCCCA AACCCTGAAA
GAAAAACTGG CTGACTTTAT AGACCAGAGT AAAATCCATG TCTCACAGCT TGGACCTGCT
TTGGGTGTTC ACGGCGGACC CGGCACGCTG GTAGTGGCTA TTAAGGAAAA ACTGGGCAAT
ATCGGCACTG CTACTGATGA AACTGAAGAT AGAAAGTCAT TTAAGCTGCC TTCCATCCAC
CTGCCCAAGC TGGGTTTTTC CAGCCTGCAT TAG
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| Protein sequence | MSVKIVTDST VDLLPETIKE LGITIVPVYV MSGNKTYRDG LDITQTEIYN RMLTGEQFTT
SQPTPADFAS VYKNLSKETD QIVSLIMSAK LSGTYNSAVQ GRELAKSSSN IELIDTKATS
GALGLLATQA AEMAKMGESA GNIIDTVRNN IPHVHIWALL DTVKYVLRSG RLSSASNLIS
GVLSIRPMIT LREGSLWPAS IHRTRNKGLE KLAELVKTNR NVEAVQIVQS VDLAEAQTLK
EKLADFIDQS KIHVSQLGPA LGVHGGPGTL VVAIKEKLGN IGTATDETED RKSFKLPSIH
LPKLGFSSLH
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