Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1066 |
Symbol | |
ID | 5131795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1056343 |
End bp | 1057419 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529991 |
Product | twitching motility protein |
Protein accession | YP_001214524 |
Protein GI | 147669706 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAGAGA TATATGAACT TCTGAAACTG GTAGTGGACA AAGATGCTTC AGATTTGCAT ATCAAGGCCC CCACCTCACC TGTCCTGCGG ATAAACGGAG ACCTGATACG CCAACCCCAA TACCCGCCGA TTACCCCGGA AGATGCCGAA CAAATTTTCA AGTCCATCAC CACCCCTCAC CAGCAAGAGG TATTTGCATC TGATAATGAA CTGGATTTTG TTTACTCCGT CACCAATCTG GCCCGCTTCA GGGTAAATGT ACTCCGCCAG AGAGGCAGTC TAAGTCTGGC CTTCAGGGTG GTACCCTTTG TTATCCGCAA TATAGACGAA CTTAACCTGC CCCCCATTCT GAAAAGCCTG ATCATCCGCC CCAGAGGGCT GTTGCTGGTT ACCGGCCCTA CCGGTAGCGG CAAATCTACA ACTCAGGCTG CCATGATAGA ACACCTGAAC AACTGCCGCA GATCCAATGT GATTACTATT GAAGACCCCA TAGAGTATCT TTTCCATGAT AACGAGTGCA TTATATCCCA GCGTGAACTT GGGGGAGACA CCCGTTCTTT TGCTATAGCT TTGAAACACG CCCTCCGCCA TGACCCGAAT GTAATTGTAA TTGGCGAAAT GAGAGACCTG GAAACCATAT CCACCGCTAT TGCCGCCGCC GAAACAGGCC ATTTGGTAAT AGGCACACTC CACACCACCG ACGCCCCCCA AACAGTAGAC CGTTTGATAG ATATGTTCCC CCCTTCCCAA CAGCAACAAA TTCGCCTCCA GCTTTCCCAA GTATTGGAAG CCATTATCTC CCAGACACTT ATCCCCCGCA TGGATAACAA AGGCCGGGTG GCCGCCTTTG AAATACTGAT TGCCAACAAT GCCGCCCGCA ACCTTATCCG CGAGGGTAAA ACTTTTGAAC TGCTGACAGT GATGCAACTG GGTAAAAACG ATGGCATGCA AACGCTGGAT AATGAACTGA CCCGTCTGGC CAAAGAAGGA ATCATAAGTG TAGAAAACGC TGTATTAAAA AGCAGTAATC CGGAAAGATT GCGCAAATCT TTGTCCAATC TAGGTCACGG GGCCTGA
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Protein sequence | MIEIYELLKL VVDKDASDLH IKAPTSPVLR INGDLIRQPQ YPPITPEDAE QIFKSITTPH QQEVFASDNE LDFVYSVTNL ARFRVNVLRQ RGSLSLAFRV VPFVIRNIDE LNLPPILKSL IIRPRGLLLV TGPTGSGKST TQAAMIEHLN NCRRSNVITI EDPIEYLFHD NECIISQREL GGDTRSFAIA LKHALRHDPN VIVIGEMRDL ETISTAIAAA ETGHLVIGTL HTTDAPQTVD RLIDMFPPSQ QQQIRLQLSQ VLEAIISQTL IPRMDNKGRV AAFEILIANN AARNLIREGK TFELLTVMQL GKNDGMQTLD NELTRLAKEG IISVENAVLK SSNPERLRKS LSNLGHGA
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