| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1036 |
|---|
| Symbol | |
|---|
| ID | 5131257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1029280 |
|---|
| End bp | 1030416 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640529961 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_001214494 |
|---|
| Protein GI | 147669676 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000328779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA CATGCTTACA GGAAAATCTA AACAAGGGCC TGAACATTGT TGGGAAAGCG
GCTGCCGGCC GAACTACCCT GCCCATTACA AACAATGTCC TTATCTCAAC TGATGACGGC
CGTTTGAAAC TGGCCGCCAC CAACCTTGAA ATGGCTATCA GCTGCTGGAT AGGAGCCAAG
ATAGAGGAGG AAGGGAGCAC TACCATACCT GCCAAGCTCC TGACCGAATT TGTCAGCTCT
CTGCCCAATG ATAAAATAGA CTTGAGCCTT AATGCCAAGT CAAAGGCACT TAATATTAAA
TGTGCCCGCT TTGAAGCACG CATAACCGGC GTGGATTCCA AAGACTTTCC TCCCATACCC
AAAGTAGAAA ATGGAATCTC CACCAAGGTT AGCATTGATG CCTTCCGTCA GGCCGTAAGT
GAAGTCGTAT TTGCTTCCGC TGCTGACGAA TCCCGCCCTG TACTCACTGG CGTAAACGCC
GAATTTGAAG GCAGTACTCT GACTCTGGCA GCCGCTGACG GTTTCCGTCT GGCTGTTTAT
AAATTGCCCC TGCTGGAGAC GGTAAAAACC ACTACCAAGG TAATCATACC TGCCCGCACT
CTGGGCGAGC TTTCACGTCT GGCCAGCATG GACGAAGAAG AAGCCCTGGT GATAAATGTA
GACACAGCCA AGAGCCAGAT ACTTTTCCGT CTGAAAAATA TTGAACTGGT ATCTCAGCTG
GTACAGGGTA ATTTCCCCCA GTACAACCAG ATAATCCCTC AGAGCTTTAC CACCAGAGTG
GTGATAGATG CCAACCAATT CCTTATGGCC ACCAAAACCG CCACTATCTT TGCCCGTGAC
GGCGGCGGCA TTGTCAGGCT GATGATGAAC CCCGGCGGTG ATACCACCCC CGGCAAGCTC
ACTATCTCAG CCCGCTCTGA AGAAGTGGGT GATAATACCG GTGAACTTGA TGCTGTAATT
CAGGGTGAAG AGGCTAAAAT AGCCTTTAAC GGCAAATATC TTCTAGACGT CCTGGGGGTG
CTTAAGGCTC AGCAGGTAGC GTTGGAAGTC ACCAGCCCCT CAAGCCCCGG TGTGATAAAA
CCGGTGGGTG CAGACAACTA CATACACGTT ATCATGCCCA TGTTCGTGCA ATGGTGA
|
|---|
| Protein sequence | MKLTCLQENL NKGLNIVGKA AAGRTTLPIT NNVLISTDDG RLKLAATNLE MAISCWIGAK
IEEEGSTTIP AKLLTEFVSS LPNDKIDLSL NAKSKALNIK CARFEARITG VDSKDFPPIP
KVENGISTKV SIDAFRQAVS EVVFASAADE SRPVLTGVNA EFEGSTLTLA AADGFRLAVY
KLPLLETVKT TTKVIIPART LGELSRLASM DEEEALVINV DTAKSQILFR LKNIELVSQL
VQGNFPQYNQ IIPQSFTTRV VIDANQFLMA TKTATIFARD GGGIVRLMMN PGGDTTPGKL
TISARSEEVG DNTGELDAVI QGEEAKIAFN GKYLLDVLGV LKAQQVALEV TSPSSPGVIK
PVGADNYIHV IMPMFVQW
|
|---|
| |