| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1025 |
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| Symbol | |
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| ID | 5131312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1018000 |
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| End bp | 1018908 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529950 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_001214483 |
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| Protein GI | 147669665 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGATG ATATACAAAG TTTTCTGAAT TACCTTATGG TTGAAAAAGG GTTTTCAGAG
AATACATCTG AAGCTTACGA GAATGATCTT CGCCAGATGA CAACCTTTGC TGACAAAGAG
GCTGCCAAAT CCGGCAAAAT ACCCGGCTGG GATAATTTTA CCCGCCAGAC AATGCTTGCC
TATATGCTGG ATCTCAAAGA GCGGAATTAT GCCATAACCA CTGTGGTACG CAAAATGGCC
GCTGCCAAAA GTTTTTTTAA CTTTATGGTT GCCGAGGGTA AGCTTAAAGA AAATCCCACT
GAAAATATCA GCACTCCCAA AGTGGGCAAA CCCCTGCCGG ATGCTATCAG CATAAGTCAG
GTGCGGGCTT TACTCAACCA ACCCATAAAG TCCGGCAGTT CGGAAGCAAA ACGGGATAAG
GCTATGTTGG AGCTTTTATA TGCTTCCGGC ATGCGGGTTA CCGAACTGGT AAACCTGAAC
ATGCTGGATG TAGACCTTAA AGAGGGTTTT GTGCGCTGTT TCGGCAAAGG GCGGAAAGAA
CGCATGATAC CCATTTATCC TCAGGCCGCC CAAAGCGTAC AGGAATATTT AAATGAAATC
CGCCCCAATC TGGTGCGGGC TGAAGCTGAA AAAGCTTTGT TTCTAAACAG GCGGGGAGAC
CGGCTAACCC GTCAGGGTTT GTGGCAGATT CTGAAAGCCT ATGCCCGTGA AGCTGGTCTG
GATGACGTAG TTACCCCCCA TACCCTGCGT CACAGTTTTG CTACCCACAT GCTTTCCGGC
GGGGCAGATT TGCGTTCGGT ACAGGAGCTT TTAGGCCATG CCAATATCTC TACCACCCAG
ATATACACTC ACCTTACGTC CGAGCATATA AGGCGGAGTT ATGAGAAGGC CCACCCCAGG
GCAAAATAG
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| Protein sequence | MRDDIQSFLN YLMVEKGFSE NTSEAYENDL RQMTTFADKE AAKSGKIPGW DNFTRQTMLA
YMLDLKERNY AITTVVRKMA AAKSFFNFMV AEGKLKENPT ENISTPKVGK PLPDAISISQ
VRALLNQPIK SGSSEAKRDK AMLELLYASG MRVTELVNLN MLDVDLKEGF VRCFGKGRKE
RMIPIYPQAA QSVQEYLNEI RPNLVRAEAE KALFLNRRGD RLTRQGLWQI LKAYAREAGL
DDVVTPHTLR HSFATHMLSG GADLRSVQEL LGHANISTTQ IYTHLTSEHI RRSYEKAHPR
AK
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