Gene DehaBAV1_1009 details

Gene Information

• Locus tag: DehaBAV1_1009
• Symbol: pyrB
• ID: 5131054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 997588
• End bp: 998583
• Gene Length: 996 bp
• Protein Length: 331 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640529934
• Product: aspartate carbamoyltransferase catalytic subunit
• Protein accession: YP_001214467
• Protein GI: 147669649
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0540] Aspartate carbamoyltransferase, catalytic chain
• TIGRFAM ID: [TIGR00670] aspartate carbamoyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACACA TACCCAAGAC ACCCGCAGAC ACAGAAACCC TGCTTTCAGA AGTACAAGGC 
TGGAAACATC GCCATGTACT TGATCTGGAT AACTTCAGCC GTGAAGAACT GGATATGGTT 
ATGCAGACAG CCGGCGTTAT GCTGGATATC CTGTCCCGCC CGGTAAAGAA AGTGCCGGCA 
CTTAAGGGGA AAACCATAGC TACCCTTTTT TACGAACCTT CCACCCGTAC CCGTTCATCA 
TTTGAGCTGG CGGCCAAAAG CCTTTCAGCC GATGTGTTAA ACCTGAATGT TTCCCAGAGC 
AGTATCTCCA AGGGGGAAAG CCTGCTGGAT ACGCTGGATA CGCTGGAATC ACTGGGGGCG 
GATATGGTAG TCATGCGCCA CCCCCTGTCA GGAGCGCCTT ATCTGGCGGC AAACAACTGC 
CATGCAAACA TTATAAACGC CGGTGACGGC TGGCATGCCC ACCCCAGTCA GGCACTGCTG 
GATATATTTA CCATACTAAG GCACAAATCC AGCTTGGAAG GGCTGAAAAT AACCCTGATA 
GGGGATATAA AACACAGCCG GGTAGCTCAC TCCAATATCT GGGGGCTAAG CAAAATGGGA 
GCCAAAATCA CCCTGTGCGC CCCGTATACC CTGCTACCTG AAGGACTTAA TACCAATAGC 
AAAATATTCC CTGAAGTCAC ACTGGAAACA GATATAAAGC AAGCAGTCAG CGGAGCTGAC 
GTGGTAATGG GGCTGCGCCT GCAGCGTGAA CGCCAGCAAA GCGGGCTTCT GCCCGGAATA 
CGGGAATATG CCCGATACTT CCAACTGAAC GAAGAAATAC TGAAACTGGC AAAATCAAAC 
GCCCTTGTCA TGCACCCCGG CCCGGTAAAT GAAGATATAG AACTTTCACA GTCTGTAGTG 
CACGGAGAAC AGTCTGTCAT AAAAGAACAG GTAAAAAACG GGGTAGCGGT ACGCATGGCA 
CTCTTCTATC TGTGCAGCGG AAGCAAGGAA ATATAA 

 

Protein sequence

MTHIPKTPAD TETLLSEVQG WKHRHVLDLD NFSREELDMV MQTAGVMLDI LSRPVKKVPA 
LKGKTIATLF YEPSTRTRSS FELAAKSLSA DVLNLNVSQS SISKGESLLD TLDTLESLGA 
DMVVMRHPLS GAPYLAANNC HANIINAGDG WHAHPSQALL DIFTILRHKS SLEGLKITLI 
GDIKHSRVAH SNIWGLSKMG AKITLCAPYT LLPEGLNTNS KIFPEVTLET DIKQAVSGAD 
VVMGLRLQRE RQQSGLLPGI REYARYFQLN EEILKLAKSN ALVMHPGPVN EDIELSQSVV 
HGEQSVIKEQ VKNGVAVRMA LFYLCSGSKE I