Gene DehaBAV1_1008 details

Gene Information

• Locus tag: DehaBAV1_1008
• ID: 5131119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 997037
• End bp: 997585
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640529933
• Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
• Protein accession: YP_001214466
• Protein GI: 147669648
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAAA AAGTAATACT GGGCGCCGAA GATATCCGCC GGACTTTAGC CCGCATTGCC 
CATGAAATAC TGGAAAGAAA CCAGTCCAGC CGGGATTTGG TGATTATCGG CATGTATACC 
CGGGGCGTAC CGCTGGCAAA CCGCTTGGCC GAAAATATTC TCCGCTTTGA AGGGCTTGAA 
ATCCCGGTGG GGACACTGGA TTTTTCTCTC TACCGTGATG ACCTTGATTC CCAGCGTTTC 
CATCCCACTA TCAAAAACAC GGATATACCT TTCAGCATAA ATAACAAGAT AGTGGTGCTG 
GTAGATGACG TTCTCTTTAC AGGGCGTTCC ACCCGGGCGG CTATGGATGC ACTGATAGAT 
TACGGACGCC CCAAAGCCAT CCAGCTGGCG GTACTGGTAG ACAGGGGTCA CCGCGAACTG 
CCGGTAAGGG CAGATTACAT AGGTAAAAAT ATACCCAGCG CACGGGACGA GAAGATAAAA 
GTCCGCCTGA CTGAAACTGA CGGACAGGAC GAGGTACTGA TACTGGATGA CGAAGCAGGT 
GAGGTATAA 

 

Protein sequence

MAQKVILGAE DIRRTLARIA HEILERNQSS RDLVIIGMYT RGVPLANRLA ENILRFEGLE 
IPVGTLDFSL YRDDLDSQRF HPTIKNTDIP FSINNKIVVL VDDVLFTGRS TRAAMDALID 
YGRPKAIQLA VLVDRGHREL PVRADYIGKN IPSARDEKIK VRLTETDGQD EVLILDDEAG 
EV