| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1007 |
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| Symbol | |
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| ID | 5131988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 994553 |
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| End bp | 996769 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529932 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001214465 |
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| Protein GI | 147669647 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA TACTAACAGG TCTAAACCCC GCTCAAAAAA AGGCCGTTGA AGCCGTGGAA
GGGCCGGTGC TTATACTGGC CGGTCCGGGC AGTGGTAAAA CCAGAGTTAT TACCCACCGG
ATTGCCTACC TGATAAAAGT AGTAGGTATA ACTCCCCACC GCATTATGGC TGTTACTTTT
ACCAACAAAG CCGCCCGCGA AATGGAAACC CGCTTGAACC AGCTGGCTCC TTCAGCGGTG
GGACGCCTGA CCATGGGTAC TTTCCACGCT ATTTGTGCCC GCATACTAAG GCAGGACGGT
CTTCCTCTGG GTGTGCCGTC TGACTTTGTG ATATACGATG ATGACGACCA GCAGAGCCTT
ATAAAACAGG CCATGGCTGA GCTTGAGCTT GACCCGAAAC GTTATCCGCC CGCTTCCATA
AAAAATGCTA TCAGCCAAGC CAAAAGCCAG CTGGTGCTTC CGGCCTATTA CTTTGAAAAG
GGCAGGAGCT ATTTTGAAGA GATGGTAGGC AGGGTTTATG AACTCTATGA GAAACGCCTC
AAGCAGAACA AGGCTCTGGA TTTTGATGAC CTTTTGTTAA AGGTTGTCCA GCTTTTTAAG
CAACACCCTG AGGTGCTGGC CGGATACCAG GAACGCTATC TGCATGTAAT GGTAGATGAG
TTTCAAGATA CCAATCTGGT TCAGTACGAA CTGGTCAAGA TGCTTTCAGC CAAGTACCGA
AATATCTGTG TGGTGGGTGA CCCTGACCAG TCTATTTATT CATGGCGTTC TGCAGACCTT
AGAAATGTTT TCAACTTTGA GACTGATAAT CCGGGTGCGA AAGTGATTTT GCTTGAGCAG
AACTATCGCT CCACTAAAAA TATTCTGGAA GCAGCTTCAT GTGTTATTGC CCCGAACAGC
GGACGCAAGC CTATCAGTTT GTGGACCGAA AACGAATCCG GCCAGCCTAT AGCTGTGGTG
GAAACCTTTA ACGAACAGGA AGAAGCCCAG TTTGTGGTTT CTGAAATTGA GAAGCTCACC
CGCTATGAAA AGTTCAGCCC CGGAAATATA GCTATTCTCT ACCGCACCAA CGCCCAGTCG
CGGGCTTTGG AGGAAGCTTT TATCCGTTAC GGCATGCCTT ACCGTCTGGT TTCCGGCACT
CGGTTCTACC AGCGGCGCGA GGTTAAAGAT ATTGTGGCCT ATCTGCGTTT ACTTCAAAAC
CCGCAAGATA GCGTCAGCCT CCAAAGGGTT ATAAATATAC CCACCCGCGG AATAGGGGCT
AAAACCCTTT CAGACCTTGC CCAGTTTGCC AGAGAGCAGG ATATAAGTCT CTACCAGTCA
CTTATAAATT TGTCAGATGA AAATGCCCCC AAACCGCCAA TACCCAGCCG CGGTTTGAAA
CCCCTGACTG ATTTTGGGGC TTTGCTGAAA TCACTTATCA TTGATGCTCA AACCCTGCCC
CTTTTAAACC TGCTGGACAG GCTGCTTGAG GGTATAAGCT ACCGTGAATT TCTGTTTGCA
TCCGAAGATG GAGAGGAACG CTGGGATAAT ATACTTGAGT TGCGGACTGT TGCCCAGCAG
TATCAGGAAA TACTCCCGCC CGAAGGGCTT TCGGCCTTTC TGGAAAGTGT GGCACTGGTC
TCGGATTTGG ATAGCCTTGA AGAAGGTGTT TCGGCAGTTA CCCTTATCAC CTTGCATCAG
GCTAAAGGGC TGGAGTATCC GGTGGTTTTT ATGGTGGGTA TGGAAGAGGG TGTCTTGCCC
CACAACCGTT CGTTTGATGA CCCTGCCCAG ATGCAGGAAG AACGCCGTCT GTGCTATGTG
GGTGTAACCC GTGCCAAGAA ACGCCTTTAT CTGGTGCGGG CTTTCCGTCG CTCACTTATG
GGGCAGAGCA ACGTAAATGA ACCTTCCCGT TATCTTAAAG ACATACCTCA AAGCATTACC
AAAGGCCGTG AAAAACAGCC TCTGCTTGGG CAGCAAACCC CCGGACAGGC GGTTTTGCCT
GTTATAAAAC AGCATGTGCA AAGTGCGGGC ATGCTCGTTA AGTCTGCCCC GTCTCCTGCC
CCCAAATTAC TGGAATTGGA AGCGGGTGAC AGAGTGCTGC ACCCCCAGTT TGGCGAAGGG
ATTGTGACCA GTATCAACCG GATGAAAAAT GATGCCGAGG TTATGATATC TTTCCATTCT
GTCGGCATGA AGCGCCTGCT GCTCAGTTTT GCCCGCCTGA CCAAACTGGA AAACTAA
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| Protein sequence | MQDILTGLNP AQKKAVEAVE GPVLILAGPG SGKTRVITHR IAYLIKVVGI TPHRIMAVTF
TNKAAREMET RLNQLAPSAV GRLTMGTFHA ICARILRQDG LPLGVPSDFV IYDDDDQQSL
IKQAMAELEL DPKRYPPASI KNAISQAKSQ LVLPAYYFEK GRSYFEEMVG RVYELYEKRL
KQNKALDFDD LLLKVVQLFK QHPEVLAGYQ ERYLHVMVDE FQDTNLVQYE LVKMLSAKYR
NICVVGDPDQ SIYSWRSADL RNVFNFETDN PGAKVILLEQ NYRSTKNILE AASCVIAPNS
GRKPISLWTE NESGQPIAVV ETFNEQEEAQ FVVSEIEKLT RYEKFSPGNI AILYRTNAQS
RALEEAFIRY GMPYRLVSGT RFYQRREVKD IVAYLRLLQN PQDSVSLQRV INIPTRGIGA
KTLSDLAQFA REQDISLYQS LINLSDENAP KPPIPSRGLK PLTDFGALLK SLIIDAQTLP
LLNLLDRLLE GISYREFLFA SEDGEERWDN ILELRTVAQQ YQEILPPEGL SAFLESVALV
SDLDSLEEGV SAVTLITLHQ AKGLEYPVVF MVGMEEGVLP HNRSFDDPAQ MQEERRLCYV
GVTRAKKRLY LVRAFRRSLM GQSNVNEPSR YLKDIPQSIT KGREKQPLLG QQTPGQAVLP
VIKQHVQSAG MLVKSAPSPA PKLLELEAGD RVLHPQFGEG IVTSINRMKN DAEVMISFHS
VGMKRLLLSF ARLTKLEN
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