Gene DehaBAV1_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_1004 
SymbolpyrE 
ID5131384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp991638 
End bp992201 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content50% 
IMG OID640529929 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001214462 
Protein GI147669644 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase
[TIGR01367] orotate phosphoribosyltransferase, Thermus family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG TAGTAACACT CTTTGAAAAA ACCGGAGCAA TACTAAAGGG ACATTTCCTG 
CTGACATCGG GACTCCACTC CCCCATTTAC TGGGAAAAAT TCAGAATCAT TGAAAACCCT
GAATACAACC AGCAACTCTG CAGCATGATA GCTGACCACT ACAAGGATAA AGGTATAGAA
CTGGTAGCCG GCCCTACTAC CGGCGGTATA GTACTGGCCC ACGAAATAGC CCGTCAGATG
GGGCTGAAAT GTGTCTTTGC CGAAAAAATT GCCGATAGTG AGCGCGGTTT CCGCCGCGGG
TTTGTAATAA AACCCGGTGC AAAAATACTG GTGGTAGATG ATATTCTGAC CACCGGCAAA
TCTATCCGCG AGGTACTGGC GGCGGTTAAA AAGGCCGGCG GCGAAGTGGC AGGCATAGGC
GTGCTGGTAG ACCGTTCTGA TACCGCTCTG GAGTTTAATG CACCTGTTTT CAGCTGTCTG
CGTTCAGCCA CCACTACCTA TAAACCGGAT GACTGCCCGC TTTGCCAAGA GGGTCTGCCC
TTAACCAAAC ACGGCAGCAG TTAA
 
Protein sequence
MEDVVTLFEK TGAILKGHFL LTSGLHSPIY WEKFRIIENP EYNQQLCSMI ADHYKDKGIE 
LVAGPTTGGI VLAHEIARQM GLKCVFAEKI ADSERGFRRG FVIKPGAKIL VVDDILTTGK
SIREVLAAVK KAGGEVAGIG VLVDRSDTAL EFNAPVFSCL RSATTTYKPD DCPLCQEGLP
LTKHGSS