| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1001 |
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| Symbol | |
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| ID | 5131909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 988946 |
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| End bp | 990043 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529926 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_001214459 |
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| Protein GI | 147669641 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.236112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA TGTCTCAGGC TTTGTCGCTT GCCAAACTGG CCATAGGTCA GGTTAGCCCT
AACCCGTCGG TAGGGGCTGT TATTGTTAAA AACGGCGAAG TAGTCGGGCA GGGTTTTACC
CAGCCGCCCG GCGGTGACCA TGCTGAGATA GTGGCCTTGA AACAGGCTGC CGAAAAAGCC
AAAGGGGCTA CTTTATACGT AACTTTAGAG CCGTGCTGTC ATCAGGGGAG AACCCCGCCC
TGCACCGGTT CTGTCATAGC ATCAGGCATC AAAGAAGTTT ATATTGCTAC GCTGGATGAT
AATCCTCTGG TTTCCGGCAA AGGCAAAAAA GAGCTGGAAG ATGCCGGTAT AAAGGTTCAT
CTGGGTATGA TGGAGCGTGA AGCCCGCCAG ATGAACGAAG CTTATTTCAA GCATGTTACC
ACCGGAATGC CCTTCGTAAC CGCCAAATAT GCCATGAGCC TTGACGGTAA AACGGGTACC
CGTACCGGTG ATTCCAAATG GATTTCCAAC GAAGAATCGC GCCATTTTGC CCATTATATC
CGCCATATAT CAGATGTCAT TATGGCCGGA CTTAATACCA TACTTAAAGA TGACCCCCAC
CTGACTGCCA GAGTTAACTG CGGACGGGGC GGTACATCAC ACAGTCAGCC CACTAGGGTA
ATTATTGACG ATAATGGCCG AGCGCCGTTA AGTTCCAATG TTTTTCATGT TCCCGGTAAT
ACTATTGTGG CTGTAGCCAA AGGTCTTACC CCTGAAGAAA AACAGGCGTA TGATGAGGTT
GGGGCTAAAG TGGTGGAGCT GCCGGATGAA CGGGGACTGG TAGACCTCAA AGCCCTGCTT
CGTTATCTGG GGCAAAACGG GGTAACCAGT GTGCTGGTGG AAGGCGGCGG CATTGTACTC
GGTTCGCTTT TTGACCTGAA ACTGGTGGAT AAAGTGCTGG TATTTGTAGC TCCTATCATT
ATAGGCGGCA AAGACGCCAA GATTCCGGTT GCCGGTGTCG GGGCAGAACT TATTACAGAT
TCAGCCAAGT TCAAGGATAT TACCACTACC ATATTCGGGC AGGACGTGTT GATTTCCGGT
TACGTTATTA AGGAGTAA
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| Protein sequence | MKYMSQALSL AKLAIGQVSP NPSVGAVIVK NGEVVGQGFT QPPGGDHAEI VALKQAAEKA
KGATLYVTLE PCCHQGRTPP CTGSVIASGI KEVYIATLDD NPLVSGKGKK ELEDAGIKVH
LGMMEREARQ MNEAYFKHVT TGMPFVTAKY AMSLDGKTGT RTGDSKWISN EESRHFAHYI
RHISDVIMAG LNTILKDDPH LTARVNCGRG GTSHSQPTRV IIDDNGRAPL SSNVFHVPGN
TIVAVAKGLT PEEKQAYDEV GAKVVELPDE RGLVDLKALL RYLGQNGVTS VLVEGGGIVL
GSLFDLKLVD KVLVFVAPII IGGKDAKIPV AGVGAELITD SAKFKDITTT IFGQDVLISG
YVIKE
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