| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0990 |
|---|
| Symbol | |
|---|
| ID | 5131958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 982305 |
|---|
| End bp | 982607 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529914 |
|---|
| Product | FmdB family regulatory protein |
|---|
| Protein accession | YP_001214448 |
|---|
| Protein GI | 147669630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAT ATGAATTCAG ATGCCAATTT TGCCAGAGCA CCTATGAGAA AATAGGCAAA
CCGGATGATA GCCCGGTTGA CTGCTGTCCC GGTTGCGGCG GCAGAGCTCA GCGGGTGGTG
TCCGGCTTTT CGTGGAAAAA CCAAACATCT AACCTGGTTA AATTTAAGGA CAGCGCTGAT
GAAAAAATGC ATTATGCCGA GAGGCGCTTA AACGAAGATA AAAGTCTTGA TCCCAATGCA
TGGCTATTAA AGGTAGCCCA AGATAAACTG GCTGAAAGAG CTGCGAAATC AGCCCAAACC
TGA
|
|---|
| Protein sequence | MPLYEFRCQF CQSTYEKIGK PDDSPVDCCP GCGGRAQRVV SGFSWKNQTS NLVKFKDSAD
EKMHYAERRL NEDKSLDPNA WLLKVAQDKL AERAAKSAQT
|
|---|
| |