| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0970 |
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| Symbol | |
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| ID | 5132404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 957451 |
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| End bp | 958890 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529894 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001214428 |
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| Protein GI | 147669610 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.064586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGCG TTGTATTGCC TGCTTGCAAT GAGGAGAAGT TTCTTCCCCG TTGTCTCGAC
AGTATCTGCC GACAAGACTT TGACAGCTAT GAAATCATCG TAGTAGTCAA CGGCAGCATA
GACAAAACCG CACTGGTTGC CCGCAAATAC CCCGTAAAAA TACTGCACTG CGAAAAGCAC
AGCGCCTTTT ATGCCCGGCA GATAGGTGCG GCAGCCGCCT CAGGCGAAAT AATCGTTCAG
GCAGACGCCG ATACCATTTA CCCCCCGGAC TGGCTCTCCC GCATATATGC AGATTTCAAA
CATCAACCTT CTGCAGTAGC AGTGGCCGGT ATTTACCGTT ATGCAGACCC TCCATGGTGG
GCATTTCTGG AATATTTACT GCGTCTGGTA TGTAATGCTT ATACCTGCCT GTTCCATGGC
CGCCCCATGC TTATCTCAGG GGCTAACTTT GCCTTTAAAC GCCATGTATT TGAAAGAATC
GGCGGATACC ATGTCACTAC CTTTTCGGCA GACCAATATG ATATATCCAC CCGCCTGAGT
AGACAAGGCA AAGTACTTCT TGACCGCCGT CTTATAGCCG TCACCTCTGC CCGAAGAGTA
AAAAAACCAT TCCTCAGGAT ACTGCGTGAC GTATTTAAAA ATATAGCCAT GGTAACCGGC
TGGGTCTTAC AGTATATAAA CCAATTTTTC CGCCATTTAT TCCGCAGTCC CCTGTTCTTC
CGTTCAGTCA AAAATACTTT GCCGATATTC GGTTTAGTGG GCATACTGTT CTGGGGATAC
GCCAGCCCAT CTTCGCAACT GTTCGGCAAG GTTTATTTTG AAGGGGAAGG TGAGAGCAAA
ACTATCTCCC TGACCTTTGA TGACGGCCCC AATCCCGAGT ACACCCCCGA AATACTGGCT
ATACTGGATA AATATGGTAT AAAAGCCACC TTTTTTGTGG TGGGCAAAAA CGTAGAGACT
TACTCTGAGC TAACCCGGGA AATACTTGAG CGTGGGCATA TACTAGGCAA TCATTCGTAC
AGCCATGACG CCAACCATGC CCTGTCTGAT TTCGGGGCAA AAGATATACT AAGGTGTGCC
GAAACTATCT GTAAATATAC CGGTGTTACC CCCTGTCTTT ACCGCCCGCC ATACGGAAAA
CGGTCTCCCT GGGAACTAGC GGCCGCCAAT GAAATGAATA TAATAACTGT CAACTGGGGA
TATGCAGTGG AGAGTAAAAG TCTGGATGAA ACGGACAATG CCATCTCCAA AATACTTGAT
AAAAGCGGCC CCGGCTGTAT CCTATTATTC CATGACGGTT ACGGTATAGA CGCCAATAGC
CTCCAATCTG ACTGCCAGCT GACTATCAAA GTCCTGGACA GCCTGATATC AAACCTGCTC
CAGCAGGGCT ACAAATTTGT AACTGTACCC GAATTGCTTG GGCTGGATGC TTACTCTTAG
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| Protein sequence | MISVVLPACN EEKFLPRCLD SICRQDFDSY EIIVVVNGSI DKTALVARKY PVKILHCEKH
SAFYARQIGA AAASGEIIVQ ADADTIYPPD WLSRIYADFK HQPSAVAVAG IYRYADPPWW
AFLEYLLRLV CNAYTCLFHG RPMLISGANF AFKRHVFERI GGYHVTTFSA DQYDISTRLS
RQGKVLLDRR LIAVTSARRV KKPFLRILRD VFKNIAMVTG WVLQYINQFF RHLFRSPLFF
RSVKNTLPIF GLVGILFWGY ASPSSQLFGK VYFEGEGESK TISLTFDDGP NPEYTPEILA
ILDKYGIKAT FFVVGKNVET YSELTREILE RGHILGNHSY SHDANHALSD FGAKDILRCA
ETICKYTGVT PCLYRPPYGK RSPWELAAAN EMNIITVNWG YAVESKSLDE TDNAISKILD
KSGPGCILLF HDGYGIDANS LQSDCQLTIK VLDSLISNLL QQGYKFVTVP ELLGLDAYS
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