| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0958 |
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| Symbol | |
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| ID | 5131689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 947419 |
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| End bp | 948180 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640529882 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001214416 |
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| Protein GI | 147669598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.240493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATA AGCGGGTTAT TCCATGTTTA GATGTGAATA ACGGACGGGT AGTCAAAGGC
ACCAGTTTTG TAAATCTGCG TGATGCCGGT GACCCGGTGG AACTGGCGGC CCGTTACTAC
CGTGAAGGTG CTGACGAGCT GGTATTTCTG GATATTTCCG CCACTACCGA AGAACGCAAG
ACTATGGCTG AGGTGGTGGA AAAAGTATCC AAAGAGGTTT TTATACCACT GTGTGTGGGG
GGCGGTCTGC GGAGCATTGC TGATATGACT ACGCTGCTCA GGGCAGGTGC TGACAAAGTT
TCTGTAAATT CGGCAGCAGT ATCTGACCCT GATCTGATAA GCCGTGGGGC TGAAAAATTT
GGCCGCCAGT GTATCGTGGT AGCCATTGAT GCCAAAAGGG AAGGCAATAG TTGGCAGGTT
TATACCCATA GCGGAAAGAA ACCCACCGGT CTGGATGCGG TGGAGTGGGC GATGAAAGCA
GAGCAGTTGG GTGCGGGGGA AATACTCCTG ACCAGTATTG ATGCCGACGG TAAAAATACC
GGATATGACA ACGAACTTAA TCGGGAAGTA AGTTCCCGCT TAAATATACC TGTTATCGCC
TCCGGCGGAG CAGGTAGCCC GGAAGACCTG TATAACGCCT TGGATAAGGG GCAGGCAGAT
GCGGTGCTGG CGGCTAGCAT TTTCCATTAC GGGCGGTATA GCATAGCCGA AGTAAAAAAG
TATCTTAAGA GCAAGGGTTT GCCGGTAAGG CTGGAGAACT AA
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| Protein sequence | MLNKRVIPCL DVNNGRVVKG TSFVNLRDAG DPVELAARYY REGADELVFL DISATTEERK
TMAEVVEKVS KEVFIPLCVG GGLRSIADMT TLLRAGADKV SVNSAAVSDP DLISRGAEKF
GRQCIVVAID AKREGNSWQV YTHSGKKPTG LDAVEWAMKA EQLGAGEILL TSIDADGKNT
GYDNELNREV SSRLNIPVIA SGGAGSPEDL YNALDKGQAD AVLAASIFHY GRYSIAEVKK
YLKSKGLPVR LEN
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