Gene DehaBAV1_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0940 
Symbol 
ID5131663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp925425 
End bp926432 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID640529864 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001214398 
Protein GI147669580 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAT TGCTTGAAGT AAAAAATCTG GTAACCCATT TTGTGACTCA GGACGGTATA 
GTTCAGGCAG TCAACGGGGT TTCCTTTGAG GTTAATCAAG GTGAAATTGT GGCCTTGGTG 
GGAGAGAGCG GCTGCGGTAA AACCGTGAGT TCTCTGTCCG TACTCCAGTT GATACCTCAG 
CCCCCGGGCA AGATAGTAGA TGGTAAGGTA ATATTTGCCG GCATGGACTT GCTCAAAAAG 
AGCAAAGAAG AGATGCAAAA AATACGCGGT TCGCGTATTT CCATGATATT TCAAGAGCCT 
ATGACTTCGC TAAATCCGGT ATTGACCATA GGGCGGCAAC TGACCGAAGG GCTTCAATTC 
CATCTCAAGC TGGACAAGAA AGAAGCTACC CGTCAGGCGG TGGAACTCCT GAAGTCAGTG 
GGTATTCCAC ATGCTGAAGG GCGGCTAAAC GATTATCCCC ATCACTTCAG CGGTGGTATG 
CGTCAGCGGG TTATGATAGC TATGGCTTTG GCTTGTGAAC CTCAGCTTGT TATCGCAGAT 
GAACCTACCA CTGCTGTAGA CGTAACTATT CAGGCTCAAC TGCTTGACCT GATACGCAAC 
CTGACCTTAC GTTTGAATAC AGCTCTGATT ATCATCACCC ACAATCTTGG TGTGGTAGCC 
AGATATGCCC AACGGGTGTA TGTGATGTAT GCCGGGCAAA TTATGGAACA GGGTACTGCT 
ATAGATGTTT ATCATAACCC TCTCCACCCG TATACGGCCG GACTTCTTGG TTCTGTACCC 
CGGCTGGACG AACCCAGACG CACCCGTTTG CAGCCTATAG ACGGCCAGCC CCCAGATCTG 
ATTGCACCGC CGCAGGGTTG TCCGTTCGCC CCGCGCTGTG TATATGTTAA GCCGGAATGC 
AAACTCAAAC GGCTTCCGCT GGTAGAAATA AATTCGGGCC ATTTTACAGC TTGTCTGGTT 
GCCCAGGAAG GGGCGTTGCC ATGGAAAAAG ATATTATCCT TGAAGTAA
 
Protein sequence
MTKLLEVKNL VTHFVTQDGI VQAVNGVSFE VNQGEIVALV GESGCGKTVS SLSVLQLIPQ 
PPGKIVDGKV IFAGMDLLKK SKEEMQKIRG SRISMIFQEP MTSLNPVLTI GRQLTEGLQF 
HLKLDKKEAT RQAVELLKSV GIPHAEGRLN DYPHHFSGGM RQRVMIAMAL ACEPQLVIAD 
EPTTAVDVTI QAQLLDLIRN LTLRLNTALI IITHNLGVVA RYAQRVYVMY AGQIMEQGTA 
IDVYHNPLHP YTAGLLGSVP RLDEPRRTRL QPIDGQPPDL IAPPQGCPFA PRCVYVKPEC 
KLKRLPLVEI NSGHFTACLV AQEGALPWKK ILSLK