| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0938 |
|---|
| Symbol | |
|---|
| ID | 5131661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 923017 |
|---|
| End bp | 924438 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640529862 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001214396 |
|---|
| Protein GI | 147669578 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCC TGAGTTATAA AATATTTGGC GCTCTTCTGC TTACGGTTTT ACTTTCGGTA
GGCCTCACTT CTTTTGCCGC CAACCAGCTG ACCGCCAGCC AGTTTCGCCA GTATATTATC
AGGGGAAACA ACGAATTTAT AACCAGCGTG GAAAGTACTC TGGGTACATA TTATGCCCAG
TACCAGAGCT GGAATAACGT GGATAACATA CTTGTCCAGT TGCTGGGCAG TAACGGCGGG
CGTCTGGTTT TAAGTAATGC CGGCGGACTG ATATTAGCTG ATACCGAGAA CAAATGGGTA
GGACACTTAA CAGACGAATA CAACCTATCA GACGGCAATA CGGTAAGCGT TTCCGGTACG
GCAGCGGGTT ACTTTTACTG GCTTGGCAGT GACATCAGTG CCTCCGGCAG CGGTTATGGC
AAGGGTATGC ACAACGGTCA AAACAGCACC GGCAATTCCG CCGTTACCAT CATTACCGAA
CCCCAACAGC AGCTTTTAGA CGAGATGAAC AGGTCTATCT GGATATCCGG TGCACTGGCT
GGGCTGGCCG CACTGGGGCT GGGACTACTG CTGGCTAATC AGATTATCCG CCCCATAAAT
ATCCTTAACC GCAGTGCCAG ACAAATTGCA AGCGGAAAAC TCTCCCAGCG GGTAAAAGTG
AATTCCCGTG ACGAACTGGG GGAACTGGCT GAAAGTTTCA ATCACATGGC AAAAAACCTT
GAGAACAACG AACAGTCTCG TCAGAGGCTA CTGGCGGATA TTGCCCATGA ACTGCGTACC
CCGCTTACAG TTATTGAGGG CACTGTAGAC GGTATGCTGG ATGGGGTATT CGCGGCGGAT
ACCCATCACC TTACCACCAT TAAAGAAGAG TCAGCCACTC TTACCCGCCT TATCAAGGAC
CTGCGGGATA TATCTCTGGC TGAATCAGGC AAGCTAAAAC TGGAAATGGC CCAGGTGGAT
ATAGCAGATA TTGTTCAGCG TCAGGCCAGG CAGGCATCAA TACTAGCCAA AGACAAGTCC
ATTTCCCTTA TAACAGATAT CTCAAGCGGT TCATCTGCCA TTACTGGTGA CGCCATCCGC
TTAAACCAGA TAACCTCCAA CTTGCTCAGT AACGCCCTGC GGCACACCCC TACAGGGGGG
CAGATTACCC TTAGCCTGAA GAACATGCTT TATCAGGGCA AACCCGGGGT AATGGTATCA
GTAGCTGACA CCGGAGAAGG TATACCCCCG GCAGATTTAC CCCATATCTT TGACCGTTTT
TACAGGGTAA CCACTTCCAG AGCCCGAAGC GAAGGCGGAA GCGGACTGGG TCTGGCTATT
GTAAAAGAGA TGACAGAAGC CCACGGCGGT TATGTCTGGG CAGAAAGCAC ACTTGGAAAA
GGCAGCACCT TTAATTACTG GTTGCCTGTC AGCCGCGGCT AA
|
|---|
| Protein sequence | MSRLSYKIFG ALLLTVLLSV GLTSFAANQL TASQFRQYII RGNNEFITSV ESTLGTYYAQ
YQSWNNVDNI LVQLLGSNGG RLVLSNAGGL ILADTENKWV GHLTDEYNLS DGNTVSVSGT
AAGYFYWLGS DISASGSGYG KGMHNGQNST GNSAVTIITE PQQQLLDEMN RSIWISGALA
GLAALGLGLL LANQIIRPIN ILNRSARQIA SGKLSQRVKV NSRDELGELA ESFNHMAKNL
ENNEQSRQRL LADIAHELRT PLTVIEGTVD GMLDGVFAAD THHLTTIKEE SATLTRLIKD
LRDISLAESG KLKLEMAQVD IADIVQRQAR QASILAKDKS ISLITDISSG SSAITGDAIR
LNQITSNLLS NALRHTPTGG QITLSLKNML YQGKPGVMVS VADTGEGIPP ADLPHIFDRF
YRVTTSRARS EGGSGLGLAI VKEMTEAHGG YVWAESTLGK GSTFNYWLPV SRG
|
|---|
| |