| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0929 |
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| Symbol | rpsF |
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| ID | 5131649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 914488 |
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| End bp | 914817 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640529852 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001214387 |
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| Protein GI | 147669569 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000641052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGCAA GCGAACTACT TAAATCCAGA GTTGAAAACC TGCGTGATTA CGAACTGGTG
GTTATCTTAA CCACTGACAC CCCGAAGGAA AAGGTTGAGG CCATTCTGGA AGGCATTAGC
AAGACCATAG CTGAAAAAGA AGGCAGCTTT ACCGAAGTAA ACCACTGGGG TAAGCGTAAA
TTGGCCTACC TTATAGGTAG GTATGTTGAG GGTTATTACG TGTTTATCAA GATGAAGGCC
AAGCCTTCTT CCATACGCAA GATAAGCACT GACCTGCGCA TTTCAGAGCA GGTTATTCGG
CATATGGCCA TTAATATGGA CGAAGAATAA
|
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| Protein sequence | MAASELLKSR VENLRDYELV VILTTDTPKE KVEAILEGIS KTIAEKEGSF TEVNHWGKRK
LAYLIGRYVE GYYVFIKMKA KPSSIRKIST DLRISEQVIR HMAINMDEE
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