Gene DehaBAV1_0927 details

Gene Information

• Locus tag: DehaBAV1_0927
• ID: 5131645
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: -
• Start bp: 913552
• End bp: 913995
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640529850
• Product: 30S ribosomal protein S18
• Protein accession: YP_001214385
• Protein GI: 147669567
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0238] Ribosomal protein S18
• TIGRFAM ID: [TIGR00165] ribosomal protein S18

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000227736
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTATCC AGGATAGACC TAACAGACCA GCCAGGGGTG GGCGTGGCCG CTATACCCCG 
AAGCGCAAGA TATGTTCTTT CTGCGCTGAA AAGGTTAGCC GTATTGATTA CAAGGATTCG 
GCTAAACTGG CCAGATACAT ATCTGACCGT GGCAAAATAG AACCTCGCCG CCGCACCGGA 
ACCTGTGCCC GGCACCAGAG GGCTTTGGCT AATGCCATTA AGCGGGCTCG TTTTATTGCC 
TTGATGCCCT TTGTATCCGA ACATGTTCGC CGCCAAGGCA ATGTGGCTAC TTTTTCGCCT 
ATTCGTGAGC TTAGGCCTGA ACCCAAAATT GCCGAAGCCA AGATTGAGCC TAAAGTAGAA 
GTCAAGGCCG AAGTTGCGGT ACCCGAAGTA AAAGCAGAGG TTAAACCTGC GGCAGAGGCT 
TCTAAACCTG CTGAATCTGC ATAA 

 

Protein sequence

MSIQDRPNRP ARGGRGRYTP KRKICSFCAE KVSRIDYKDS AKLARYISDR GKIEPRRRTG 
TCARHQRALA NAIKRARFIA LMPFVSEHVR RQGNVATFSP IRELRPEPKI AEAKIEPKVE 
VKAEVAVPEV KAEVKPAAEA SKPAESA