| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0903 |
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| Symbol | |
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| ID | 5132329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 886821 |
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| End bp | 890609 |
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| Gene Length | 3789 bp |
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| Protein Length | 1262 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640529824 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001214363 |
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| Protein GI | 147669545 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA AAAGGTTGGG TTTAGAAGCT TCAGAACTTC GCTATCGCCG CCTTTTCGAA
ACGGCTCAAG ACGGTATTCT TATCCTTGAC GCCAACACAG GTAAAATTGC TGATGCCAAT
CCCTTTTTAT TGAATATACT GGGTTATGCT CAGGAGGAAA TTCTGGGTAA AGAGCTCTGG
GAAATTGGTA TATTTAAAGA CATAGCTTCC AGCCGTAAAG CCTTTGCCGT CCTGCAGGAA
AAAGAATATA TCCGCTACGA AGACCTTCCT CTTAAAACAA AAAACGGGCA AATTCAGCAG
GTAGAGTTTG TCAGTAATGT TTACTGGGTG GGTGATGAAA AAATCATCCA GTGCAATATC
CGCGATATTA CTGACCGCAA ACGGGCAGAA GAACTGTTAC GAAAAACTGA AGAGCGGTAT
CGGGAGTTTT ATCAAAAATC ACCCATTGGT TATCAATCAC TGGATTCCGA AGGCCGTTTT
TTAGAGGTCA ATCAGGTTTG GCTTGACGAT ATGGGATACA AACGAGAAGA AGTTATTGGT
CATTGGTTCG GGGAATTTTT GCAACCAGAC CAAGTGGATC TTTTCAGGAA ACGTTTTCCG
GTTTTCAAAG CTACAGGTAC TGCTGACACT GAATTTTATA TGAACCGTAA AGATGGCTCG
GTAGTTCTAA TGGCGTTTAG CGGTAAAATT GGCTGTGATG CCAATGGCAA CTTTAAACAA
ACACATTGTG CTTTGCAGGA TATCACCCAG AGACATCTGG CTGATGAGGC TATACGGGAA
AGCCAGCGTA AGTACCAGGC TCTTTTTGAA AGCATAGGTG AGGCGGCTTT TGTCTGCTAT
ATCAATAACC GTGAATGGGC GGATGGGTTT GTTGAACTGA ACGCAGTGGC CTGTGATATG
CTGGGGTATA CCCATGAAGA ACTGCTGAAA ATATCTGCCC GAAATCTGTT TTTCCATCCT
TCTTCAGGTC TTTTATCAAA AGAGATAACA GATGAACTTT ATGCGCAAAA GATGGTCACC
CGTGAGTGCA ATCTCCCTCA TAAAGACGGG CATAATATTT CGGTAGAAGT GACATTTCAT
ATATTTGATT TACAGGGCCG GCCTGCCGTG CTCATCTTAG CTCATGATAT TACCATCCGT
AAAAAAATCG CCCGTGAATT GGAGCAAAGC CATAGAAGAT TAGTAAAAGC CGAAAAGGTA
GCCGGGTTTG GTTACTGGGA ATTTGATCTG GCAAACGGAG TAGTACACCC TTCTGATGGT
GCCAGAGAGA TATACGGTTT AAAAGAGGGA ATATTAACTA TTCCTTTTGT CCAGCAGATA
CCTGTTCCCG AAGACCGGCC TGCTATGGAT AAAGCACTGA ATAATCTGAT TAAACAGAAT
ATTCCGTATG ATATTGAGTT TAAAATCAAA CGCCCCACTG ACGGGGCTAT ATTATATATA
CACTCTATTG CGGAGTTTGA TTCCAAGCGA AATGTGGTGT TTGGCACTAT CCAGGATATT
ACCAAAAGAA AACAGGCCGA AGAATTACTC CGTGAGAGTG AAGCCAGATT CCGCTCAACT
TTTGACCAGT CACCCATAGG TGCTGCCATA TATGGTTTAG ATCTTAAATA CCGGCAGGTA
AATGAAAAAT TTTGCCAAAT GCTGGGATAC TCTGCCTCGG AATTTACCAG CCTGAAAGTC
AGTGATATCA CCAACTCAGA TGATTTTGCG AAAGACATTA TCCATTTGAA TCGTCTGAAA
AACGGGGAAA TCAGCCGTTA TGAAACGGAT AAAAGATATC TTCAAAAGAG CGGCAGCATA
TTTTGGGCAC ATCTGTCGGT AGCCGGTATC AGAGATGTAA CGGGTAATTT GCTCTATTAT
CTAGCCATGA TTGTAGATAT TACGGCCCGC AAAGCAGCTG AAGATGCCCT TCAAAAATAT
AAACTGATTG CTGAAGACAG CCGGGATATT ATACTGTTTA TGAACAAGGA AGGCGGGCAA
CTATTGGAAG CCAATAGTGC GGCTGTAAAA GCTTATGGAT ATAGCCGTGA GCAGTTATTG
TCCATGAAAA TACAGAACCT GCGCGCCCCT CAGGCAAGGG TGCTTACCGC AAGGCAACGG
AATCAGGCCT ATGTCCGTGG TATGCTTTTT GAAACTTTCC ATCAAAGTAA AGACGGGCGT
GTTTTCCCTG TGGAGGTCAG TTCGCGGGGG GCGGATATTG AAGGGACAAC AACCCTGATA
AACATTATCC GTGACACCAC CGAGCGGAAA CAGGCTGAAA ATGCCTTGAA CGAAAGCCTT
CAAAATTATC AAGTGCTTTT TAATAGTGTT ACAGATGCTA TTTTAGTGCA TCAGCCGGCG
GCAGATTATT CAGCCGGCAA ATTTATCGAA GTGAATGACG CCGCTTTAGC AATGCTGGGA
TATAGCCGAA AAGAGCTCTT GCAAATAACC CCCATGGATC TTATGTCCAA AGGGAAATAT
CCAGTTAGTG CATTTGCTGA CAACATTAGG TATATAGAGA AAAATACTGA AGTTGTATCT
GAGTACACCA TGGAAACAAA ATCCGGCAAA ACCATCCCGG TGGAATTGCA CTCACGTATG
TTTAAGTTTG GTGGCAAGCG TACCGTTATT ACACTTGCCA GAGATATAAG TGAACGAAAA
AAAATGGAGG AAGAACAGAA GAAACTGCGT TACCAGTCAG AAATGTCCAG CCGTTTGGCG
GCAGTAGGTG AAATGGCGGC CGGCATTGCC CATGAGATAA ACAACCCGCT GACGGGGGTG
ATTGGTTTTG CCTCCATACT TATGGAGAGG GAGGATTTGC CGGCAGATGT CATGGATGAA
CTTCAGATAA TTAATTCCGG CAGTCAAAGA GTAGTGGAAA TTGTAAAACG TATGCTTACA
TTTGCCCGCC AGGCCAAGCC CGTGAGAAGC AGTGTAAATA TCACCGAACT TATTGATAAT
ACTTTGGATT TACGCAGTTA TGTACTTAAA ACTGCAAATA TAGAGGTAGT CAGGCATTAC
GAACCTGAGT TACCGTTATT GACAGTTGAC TCCGGCCAAA TGCAGCAGGT GATTTTGAAC
TTGATATTAA ATGCCGAGTA TTCCATGAAA AAAGCCCATG AAAAAGGTAT CCTGACTATC
AGAGTTAAAA AAGAAGGGGA ATGGGTGAGG ATGTCTTTTC AGGACAATGG ACTGGGCATG
TCGACTGAAA CATTGGGTAA ACTGTTCCAG CCTTTTTTCA CTACCAAAGA TCCCGGTGAA
GGTACCGGTT TGGGTCTGAG CCTGTCTCAC GGCATTATAC TTGCGCATGA AGGTACAATT
CGGGGGGAAA GTATACTCGG TGAGGGGGCT GAATTTACAA TTGAGTTGCC CATAAAACCC
TCTGACAAAG TACCCGCAGC AAACGATACG ACCGGGGTGG TGCAGGGTCT GACTAAAAAA
GCATCAGTAC TGGTGATTGA TGATGAGGCC GCAATCAGGG CCTTGATACG GATTGTGCTT
ACGCAGGATG GCTATCGCGT GGATGAGTGT GATGTCCCTC AAAAAGCTAT GGATATGATT
TCAAATAATA ATTATGATGT TATCCTGCTG GATATACGCA TGCCCGGAGT GAGTGGTCTT
GAGCTTTATT CTGAGATAAC CGCCGAATGG CCTCAGATGG CTAAACGGGT GATTTTTATA
ACAGGTGATA CATCTGATGC ATCTATTAGC AACCTTATGG TTGCCAAAGG TATTCCCTAT
ATTAATAAGC CTTTCAATAT TGCAACCTTG AAAAACACGT TAAATAGCAT ACTCTCACGG
GCAAATTGA
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| Protein sequence | MNNKRLGLEA SELRYRRLFE TAQDGILILD ANTGKIADAN PFLLNILGYA QEEILGKELW
EIGIFKDIAS SRKAFAVLQE KEYIRYEDLP LKTKNGQIQQ VEFVSNVYWV GDEKIIQCNI
RDITDRKRAE ELLRKTEERY REFYQKSPIG YQSLDSEGRF LEVNQVWLDD MGYKREEVIG
HWFGEFLQPD QVDLFRKRFP VFKATGTADT EFYMNRKDGS VVLMAFSGKI GCDANGNFKQ
THCALQDITQ RHLADEAIRE SQRKYQALFE SIGEAAFVCY INNREWADGF VELNAVACDM
LGYTHEELLK ISARNLFFHP SSGLLSKEIT DELYAQKMVT RECNLPHKDG HNISVEVTFH
IFDLQGRPAV LILAHDITIR KKIARELEQS HRRLVKAEKV AGFGYWEFDL ANGVVHPSDG
AREIYGLKEG ILTIPFVQQI PVPEDRPAMD KALNNLIKQN IPYDIEFKIK RPTDGAILYI
HSIAEFDSKR NVVFGTIQDI TKRKQAEELL RESEARFRST FDQSPIGAAI YGLDLKYRQV
NEKFCQMLGY SASEFTSLKV SDITNSDDFA KDIIHLNRLK NGEISRYETD KRYLQKSGSI
FWAHLSVAGI RDVTGNLLYY LAMIVDITAR KAAEDALQKY KLIAEDSRDI ILFMNKEGGQ
LLEANSAAVK AYGYSREQLL SMKIQNLRAP QARVLTARQR NQAYVRGMLF ETFHQSKDGR
VFPVEVSSRG ADIEGTTTLI NIIRDTTERK QAENALNESL QNYQVLFNSV TDAILVHQPA
ADYSAGKFIE VNDAALAMLG YSRKELLQIT PMDLMSKGKY PVSAFADNIR YIEKNTEVVS
EYTMETKSGK TIPVELHSRM FKFGGKRTVI TLARDISERK KMEEEQKKLR YQSEMSSRLA
AVGEMAAGIA HEINNPLTGV IGFASILMER EDLPADVMDE LQIINSGSQR VVEIVKRMLT
FARQAKPVRS SVNITELIDN TLDLRSYVLK TANIEVVRHY EPELPLLTVD SGQMQQVILN
LILNAEYSMK KAHEKGILTI RVKKEGEWVR MSFQDNGLGM STETLGKLFQ PFFTTKDPGE
GTGLGLSLSH GIILAHEGTI RGESILGEGA EFTIELPIKP SDKVPAANDT TGVVQGLTKK
ASVLVIDDEA AIRALIRIVL TQDGYRVDEC DVPQKAMDMI SNNNYDVILL DIRMPGVSGL
ELYSEITAEW PQMAKRVIFI TGDTSDASIS NLMVAKGIPY INKPFNIATL KNTLNSILSR
AN
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