| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0895 |
|---|
| Symbol | |
|---|
| ID | 5131964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 880140 |
|---|
| End bp | 880952 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640529816 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001214355 |
|---|
| Protein GI | 147669537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAA ATAACCCCAA TATATTTAAC ATAAATGATA ACGAATTTAA TATAATCCAA
AAAGGACTGG ACCCAGAACA GGTAAAGTCT TTTGTGGGAA AGCTGATTGA AGAAAATGGC
AGTCTTACTG CGGAGCTTAA CAAACTCAAG GAACAGACTG AACATCTGGA GTCTTTAAAG
AGGCTGGCGG ATACAACTAT TATAGAGGCT GATAAACTGG CGGCTACCCT TAAGGAAGAA
GCTATTACTA AAGCAAAAGA AGAGTCTGAC AGTTTACTGG CAAAGGCTGA GGAAAAGGCC
AAAAAAGTTT ACGAACAGAT TTACCGCCAG CTAAATACCC TGAAACAACA GGTAAATAGT
TTGGATAAAG ATTTTGACTT TAATACTGAA GGCGAAAAAC CTGCGATTGA GCCCGTAATA
CCCGCCGCGG TTAAAGAAAC CCCAGTCAGA GCTAAAGATG ATTTTATGGC GAAAGCGGTA
GCCAATTCGG ATATTATGGA ATCTACTACC CAGGAACTGG TTATACGGGA TAAAGAAATA
GAGTTGGAAA TATTGCCACC GGTAGATGCT GTCAAGATTA CCAAAATCAT GGATCAACTG
GAAAATGCCA GCGAGGTAGA AGTGGTGGAG CTGATACCCC GCCCCAATCA TCCGGTAATT
ATTGTATATG AAAATAAACC CAACAGCCTG CTGGATGTGC TTAAAAAATT GAGCATGGTA
GGCAAGGTAA ATGAAATTCC GGCCAGCCCG AACGGAAGCG GAATTGTGCG GCGTAAATAC
GAGATATCTC TGGTAGCAAG CGTTGTTAAG TAA
|
|---|
| Protein sequence | MAGNNPNIFN INDNEFNIIQ KGLDPEQVKS FVGKLIEENG SLTAELNKLK EQTEHLESLK
RLADTTIIEA DKLAATLKEE AITKAKEESD SLLAKAEEKA KKVYEQIYRQ LNTLKQQVNS
LDKDFDFNTE GEKPAIEPVI PAAVKETPVR AKDDFMAKAV ANSDIMESTT QELVIRDKEI
ELEILPPVDA VKITKIMDQL ENASEVEVVE LIPRPNHPVI IVYENKPNSL LDVLKKLSMV
GKVNEIPASP NGSGIVRRKY EISLVASVVK
|
|---|
| |