| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0890 |
|---|
| Symbol | |
|---|
| ID | 5131058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 876108 |
|---|
| End bp | 877325 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529811 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001214350 |
|---|
| Protein GI | 147669532 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0223562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAAAA AGAAATTAAA TATTGCCCTT GTCAGCCTGC ACAGCTGTCC TCTGGGGCAA
CCCGGAGGAC GGGATACCGG CGGTATGAAT GTGTATATCT GCGAGTTGGC GCGCTCTTTG
GGAAATAGCG GTCACCAAGT TGATATTTAT ACCCGTGCCC ATGACCCCCG TGATGACGTA
TGGGAGTTTT TAGCCCCCAA TGTTCGGCTT ATTCACATTC AGGCCGGGCC GGTAGAAGAT
ATGGGAAAGC TGGCTCAGTA TGAGCATCTG GAAAGCTTTG TTTGCGGGCT GGAGGCATTC
CGTAAGGCTG AAGGTATTAA ATATGATCTC ATCCACAGCC ATTACTGGCT GTCTGCCAGA
GCAGGGCTGG CGTTAAGCAA ACTCTGGGAA GTGCCCCATC TGGTTATGTT TCACACGCTG
GGAAAGGTTA AAAACCGTTT GATGCAGGCA CAGGTTGACC CCCAGCTTCG GCTGGATGCC
GAACAAAATA TAGTACACGA AACAGACTTG ATAATAGCCG CTACTCAAAA TGAAAAAAAT
GACCTGATAT CTCTATATCA GGCTGAACCA GATAAAATAA GGGTAATCCC ATGCGGGGTA
AATACAAGGC TTTTTTCCAT CACTGACCGG GCTGAGGCTG AGGCAGAATT GGGGCTTTCC
GCCGCCCCCA AAGCGTTATT TGTGGGGAGG CTGGAGAAAC TTAAGGGGCT GGATAATCTG
CTCAAGGCGG TTTCACTGAT TGAGGCTGAT ATGGAGCTTC TGGTGGTTGG CGGTGATGAA
TATAGCCAAG GTGAAAGAAA CAGGCTGGAA AAAGTGGCGG AAGAGCTGGC TATTTCAGAT
AAAGTGAAAT TTTACGGGTC GGTCAAACAG GACGTCCTGG CAAAATATTA TAATGCCGCC
AAAGCTTGTA TAATCCCATC GTATTATGAA AGCTTTGGCA TGGTTATACT GGAAGCTATG
GCTTGTGGTA CTCCGGTTAT CAGCGGCAGA GTAGGGGTTG CTCCTGATAT CATTCGTCCG
GGTATAAACG GTTGCCTTAT CCCCGGTAAT CAACCCGAAC AACTGGCACT CTGCCTGAAG
GAATGGCTTT ACCAAAAAAT CGCTAACCAT AAGGCTATAC GTAAAATAGC AGAAGAATAT
ACATGGCAGT CTGTGTCCGC TCAAATAGAG TCTGTATATT ATGGTATTTT AGACCCTGAA
ACAGCAGGGG TTCTATAG
|
|---|
| Protein sequence | MAKKKLNIAL VSLHSCPLGQ PGGRDTGGMN VYICELARSL GNSGHQVDIY TRAHDPRDDV
WEFLAPNVRL IHIQAGPVED MGKLAQYEHL ESFVCGLEAF RKAEGIKYDL IHSHYWLSAR
AGLALSKLWE VPHLVMFHTL GKVKNRLMQA QVDPQLRLDA EQNIVHETDL IIAATQNEKN
DLISLYQAEP DKIRVIPCGV NTRLFSITDR AEAEAELGLS AAPKALFVGR LEKLKGLDNL
LKAVSLIEAD MELLVVGGDE YSQGERNRLE KVAEELAISD KVKFYGSVKQ DVLAKYYNAA
KACIIPSYYE SFGMVILEAM ACGTPVISGR VGVAPDIIRP GINGCLIPGN QPEQLALCLK
EWLYQKIANH KAIRKIAEEY TWQSVSAQIE SVYYGILDPE TAGVL
|
|---|
| |