Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0885 |
Symbol | |
ID | 5131767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 872664 |
End bp | 873197 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529803 |
Product | transcription antitermination protein nusG |
Protein accession | YP_001214345 |
Protein GI | 147669527 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0219053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTA AACAGAAGAA CTGGTATGTG GTGCATACCT ATTCAGGGCA TGAGGAAAGA GTCCGTAAAG GTCTTGAAGA ACGGATTAAA TCCATGGATG CCGAGGATGA TATAGAGCGG GTTGTACTGC CTACCGAAGA AGAAGTTGAA GTCAAAAACG GTCAGCGGCG AACTATCCGG AAAAAAATAC TGCCCGGCTA TGTGCTGGTG CAGATGAACA TGAACGATAA AAGCTGGACT ATAGTCCGCA ATACTCCCGG CGTTACCGGT TTTGTAGGCT CTGAGGGCAA ACCCACCAAT TTGCCGCCCG AAGAAGTCAG CCGTATTCTG GACCAAATGG AAGCTGAATC ACCAAGGGTT AAGGTGGGTT TCCGCAAAGG ACAGAGTGTC AGGGTTATTG ACGGACCGTT CGTTGATTTT ATTGGCATGG TAGACGAAAT TAACACTGAA AAAGGCAAAG TCAAGGTGCT TCTTTCCCTG TTCGGGCGGG AAACACCTGT TGAACTTGAC TTTTTGCAGG TCGAAAAGCT CTAG
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Protein sequence | MTVKQKNWYV VHTYSGHEER VRKGLEERIK SMDAEDDIER VVLPTEEEVE VKNGQRRTIR KKILPGYVLV QMNMNDKSWT IVRNTPGVTG FVGSEGKPTN LPPEEVSRIL DQMEAESPRV KVGFRKGQSV RVIDGPFVDF IGMVDEINTE KGKVKVLLSL FGRETPVELD FLQVEKL
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