Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0864 |
Symbol | |
ID | 5131670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 854798 |
End bp | 855691 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529782 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001214324 |
Protein GI | 147669506 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAT TAGGCAGACT TATTACCGCC ATGGTAACCC CGTTTAAAAA AGACGGGACA GTAGATTATG CTCAGGCTCA GAAATTGGCT CTGGGGCTGT TAGATTCAGG CAGTGACGGG CTGGTAGTAG TTGGCACCAC AGGTGAATCT CCCACCGTTA CCTGGGAAGA AGAACACGCC CTGTTTGCAG CCGTAAAATC TGCTGTCGGC AACAGGGGCA AGGTTATTGC CGGTACGGGT GCCAACAGCA CTCAGGAAGC ATTGGAAAAC ACTCTCAAAG CCGAAAAGAT AGGGGTAGAT GCCTGTTTGC TGGTAGTGCC CTATTATAAC AAGCCTACCC AAGAGGGTTT GTATCTCCAT TTCAAGACCA TTGCAGAGGC TACCAAGCTT CCCTGCATAC TTTACAATGT ACCCTCACGG ACTATTACCC ATATGAACCC GGAAACAGTA ATCCGCTTGA GCCAGATACC CAATATTGTG GGTATCAAAG AAGCCAGCGG CAAACTGGAT GATATCGCCC AAATAATAAA CAATGTCCGC CCTGATTTTA CCGTCTGGAG CGGAAATGAT AGTGATACCC TGCCCATGCT GGCAATGGGT TCTTACGGGG TAATCTCGGT AGCATCACAT CTGGTAGGCA ACCAGATAAA AGACATGATA ACCAGCTTTG TATCAGGCAA TACAGAGCAT GCGGCTGCTA TCCACCGCCA CCTGACGCCG CTGATACGCT CACTCTTTGT AGTATCCAAC CCCATACCCA TCAAATATGC CCTGAATTAT CTGGGGGTTG AAGTGGGCGG GCTGAGACTG CCCATGACCG AAGCAGATGA GAAAACTGCT GCCCTTATAC GCGAAAGCCT GAAGGGCTAT ACTATTGACC TGCCCATAAA ATAA
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Protein sequence | MKELGRLITA MVTPFKKDGT VDYAQAQKLA LGLLDSGSDG LVVVGTTGES PTVTWEEEHA LFAAVKSAVG NRGKVIAGTG ANSTQEALEN TLKAEKIGVD ACLLVVPYYN KPTQEGLYLH FKTIAEATKL PCILYNVPSR TITHMNPETV IRLSQIPNIV GIKEASGKLD DIAQIINNVR PDFTVWSGND SDTLPMLAMG SYGVISVASH LVGNQIKDMI TSFVSGNTEH AAAIHRHLTP LIRSLFVVSN PIPIKYALNY LGVEVGGLRL PMTEADEKTA ALIRESLKGY TIDLPIK
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