| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0861 |
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| Symbol | |
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| ID | 5132168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 850798 |
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| End bp | 852960 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529779 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001214321 |
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| Protein GI | 147669503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAACTG CCAACTCATT TGAACGAACT ATCGGCGGCA GGAAACTTGT TATTGAGAGT
GGGAAACTTG CCCGTCTTGC AGATGCCGCG ATTACTATCC GCTATGCGGA TACTGAATTA
CTGGTAACAC TTTGTTCTGC CAAGAAACCT CGCGAAGGGG TAGATTTTCT CCCCCTGACT
ATAGATTACG AAGAGCGGAT GTATGCCGCC GGCAAAATCC CCGGCGGGTT TATCCGCCGT
GAAGGCCGCC CCAGTGAACA GGCTATTTTG GCTGGGCGAC TGACTGACAG ACCTCTTCGC
CCTCTTCTCC CCAAAGAGTG GCGCAATGAT CTTCAGATTA TTATTACCGT AATTGCTTCA
GACAAGGAAA ACGACGCTGA TATCTGGGGC GTAGTGGGTG CTTCCACAGT TCTGGCCATG
TCTGAAATAC CATATGAAGG TCCGGTCGGA GCCAGCCGTA TTGGATATAT AAACGGTGAA
TTTGTGCTTA ATCCCACTTT TGCCCAGTTG GAATCAAGCC AGCTGGATCT GGTGGTAGTC
AGCACCCGCA AAGCGGTGGT GATGATTGAA GCCGGTTCCA AAGAAATTCC TGAAGACATT
ATGATTAACG CTATTGAGTT TGCCCATAAG GCAAATCAAG AGCTTATTGA CCTCCAGGAT
GAAATCCGTG CCAAGCTCGG CAAAGAAAAG CTACCCGTGC CGGTGCTTGA AATACCCGAA
GAAGTCAAAA CGGCTGTTGC CGCTTTTGTA AAAGGACGGG TAAATGAAGC CCTTAGCCAC
CAAGATAAAA CCGCCCGTGA AAATGCGGTT GAAGGCCTTC AGGCTGAACT GGTTGCGGCT
TTATCAGAAA CATTCGCCGA AGGTGATATC CTGGCCGCTT ATGACAAAGA AATCAAGAAA
GCTATCCGCT CTACTATACT TGAGAAGGAT ATCCGGGTAA ACGGACGGGG TATCAAACAG
CTTCGCCAGC TGGATGCTGA AACAGGGCTT TTGCCCCGCG TCCATGGCTC TGCTTTATTC
ACCCGCGGTG ATACCCAGGT CATGGCTATA ACCACCCTTG GTTCTTTACA GGAATCCCAA
CAGCTGGATG GCTTAAGTGC CGAAGATACC AAGCGTTTTA TGCTTCACTA CAACTTTGCC
CCCTTCTCTA CCGGTGAAGT AAAACGTTCC GGTTCTCCCG GACGGCGTGA AATCGGTCAT
GGCGCTTTGG CCGAACGTGC CTTAGTGCCT ATCCTGCCCA CTCCGGAAGA ATTCCCCTAT
ACCATTCGTC TGGTAGCTGA CGTGGTTGGC TCATCAGGCT CTACCTCTAT GGGCAGTGTC
TGTTCGTCCA GCCTGTCACT TATGGATGCA GGCGTACCGG TCAAAAAAGC TGTCGCAGGT
ATCTCCATCG GCCTTATTAC CGGTGAAAAT GGTACCTACT GCACCATTAC TGATATTGAA
GGCATCGAAG ATAACTATGG CGATATGGAC TTTAAAGTTG CCGGTACCCG TGACGGCATA
ACCGCCATAC AGGTGGATAT GAAGGTCAAG GGTATCAGTT TTGATATTAT CCGTGATGCC
ATATACCAGG CAAAAGAAGC CCGCTATAAC ATACTGGATG TAATGGACAA AGCTCTTGCC
CAGCCTAAAA CAGAGCTTAG CCCTTATGCC CCCAGAATGT ACAAGATAAA TATTGACCCC
TCCAAGATTG GCAGTGTTAT CGGCAGCGGC GGCAAAACTA TCCGCTCTAT TATTGAGCAA
ACCAATACTA CCGTTGACAT TGAAAATGAC GGCACAGTGG TTATTGGTGC TATTGACGAG
GCTTCGGCTA AAAAGGCCAT CAAGATAATT GAAGACCTGA CTAAAGACAT CGAAGCCGGC
AGTATTTATA CCGGTAAGGT CACCCGTATA ATGACCTTCG GTGCTTTTGT TGAAATCCTG
CCCGGAAAAG AAGGCATGGT ACACATAAGC GAACTGGCCG ACCATAGAGT TGAAAAAGTG
GAAGATATAG TCAAGGTGGG TGATGATATA ACGGTTAAGG TTATAGAGAT TGATAACCAG
GGCAGGGTAA ACCTGTCACA CAGGGTTATT CTCAACCCGA ACGCTGTACC CATTTCACGC
AATCGTGATT CTCAGCCGCG TCGTCCCGGT CCTTTCCGCC CTTCTGACCG GTCTAACTCA
TAA
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| Protein sequence | MITANSFERT IGGRKLVIES GKLARLADAA ITIRYADTEL LVTLCSAKKP REGVDFLPLT
IDYEERMYAA GKIPGGFIRR EGRPSEQAIL AGRLTDRPLR PLLPKEWRND LQIIITVIAS
DKENDADIWG VVGASTVLAM SEIPYEGPVG ASRIGYINGE FVLNPTFAQL ESSQLDLVVV
STRKAVVMIE AGSKEIPEDI MINAIEFAHK ANQELIDLQD EIRAKLGKEK LPVPVLEIPE
EVKTAVAAFV KGRVNEALSH QDKTARENAV EGLQAELVAA LSETFAEGDI LAAYDKEIKK
AIRSTILEKD IRVNGRGIKQ LRQLDAETGL LPRVHGSALF TRGDTQVMAI TTLGSLQESQ
QLDGLSAEDT KRFMLHYNFA PFSTGEVKRS GSPGRREIGH GALAERALVP ILPTPEEFPY
TIRLVADVVG SSGSTSMGSV CSSSLSLMDA GVPVKKAVAG ISIGLITGEN GTYCTITDIE
GIEDNYGDMD FKVAGTRDGI TAIQVDMKVK GISFDIIRDA IYQAKEARYN ILDVMDKALA
QPKTELSPYA PRMYKINIDP SKIGSVIGSG GKTIRSIIEQ TNTTVDIEND GTVVIGAIDE
ASAKKAIKII EDLTKDIEAG SIYTGKVTRI MTFGAFVEIL PGKEGMVHIS ELADHRVEKV
EDIVKVGDDI TVKVIEIDNQ GRVNLSHRVI LNPNAVPISR NRDSQPRRPG PFRPSDRSNS
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