| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0858 |
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| Symbol | |
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| ID | 5132175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 847712 |
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| End bp | 850006 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529776 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001214318 |
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| Protein GI | 147669500 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00289553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAACTA CCGAGTTTTT GGCCTATATT GCATCTCTGC CTGATTATCA GGAGCAGATA
GCCCACATTG AACGCTTGCC ATACCGCCCG GCGGAATATG CCAAACCAGA TGCCCCGCTT
TTACCCCAGA TAGATGCCCG CCTTAGGAAA AAACGAATTT TGCCGTTATA TACCCACCAG
GTAACCGCCG TAAATCTTTG CCGGCAGGGT AAAAACATAA TTGTGGCTAC CCCGGCGGCC
AGCGGCAAAA GTTTGTGCTA TAACCTGCCG GTACTTGAAA AACTGGTATC GGACCCGAAT
GCCAGAGCCC TATATCTTTA CCCTACAAAG GCTTTGGCAC AGGACCAGTT GCGAAGCCTG
AAATCATTTG CGGTGCCATC ACTGCTTTTG GCTGAAGAGA TGGATGTGTA TGACGGTGAT
ACCCCGAACC GTAACCGTTC GGATATCCGT TTGCAGGCAA GGATTATACT TTCCAACCCG
GATATGCTTC ATGTGTCCAT ACTGCCGTCC CACCAGAAAT GGAGCCGTTT TTTACGCCAT
CTGGAATATG TGGTTATAGA CGAAGCCCAC ATCTACCGTG GGGTATTTGG TTCGCATCTG
GCAAATATCA TAAGGCGGCT TCGGCGTATT TGCAGTTACT ATGGCAGTTC ACCGAAGTTT
ATTCTCAGTT CAGCTACTAT TGCCAGTCCC GGCACTCACG CCCAAAGTTT GACCGGACTG
CCTTTTTCAG TGGTGGATAA TGACGGTGCT CCCAGAGCAG AAAAGGATTT TATTTTTTGG
AATCCGCCTA TTATTGACCC TGCTAACGGG ATGCGTCATA GTGCCAACTC GGAGTCCGCG
TTTCTTTTAA GTGAGTTGGT CAGCCACGAA ATCCGCACGC TGGATTTTGC TCGTACTAAA
CGGCTTACCG AGCTTATTTA TAAATATTCG CGTGACCGCC TGATAGCCAT AAAACCCGAA
TTTGCCGACC TTATCAAGCC ATATCGGGGA GGATATACTG CCGAAGACCG CCGCAAAATA
GAAAAAGAAC TTTTCTCAGG TAAATTGCTG GGGGCGGTTT CCACCAATGC ACTGGAACTG
GGGGTGGATA TCGGTGACCT TGGGGCTAGC ATACTGACCG GTTTTCCGGG CAGTATTTCC
AGCACTTTCC AGCAGGCGGG GCGCAGCGGC AGAAGGTGCG GACACTCTCT TTCATTTTTG
CTGGGGCTGG ATAATCCGCT TGACCAGTAC TATATGAATA ACCCTGAAAG GTTGTTTAAC
AGCGGTTTTG AAAGTACTTT TATAAATCCT GAAAATCCGT ATATATATAA AGCCCACCTG
TTATGTGCTG CTTGGGAAAT ATCCTTAAAT GAATCCGAAA CAGATATTTT CGGAGAAAAT
CTGGCTGAAG AACTGGAAAT ACTCTCCGAA GAAAGAGTAC TTAACAAGCG GCGGGGCAAT
TATTATATAT CAGCAGATAT TTCTTATCCT GCCAGAGATG TCAGTATCCG TTCAGCTTCG
GGCAAGGATT TTTGCCTGGT AGATGCGCAG AGCGGACAGA TTATTGAAAC GCTGGACTAC
CAAACAGCTT TTCTGCAGGC CTATCCGGGG GCAGTTTACC TGCATCAGGG TGAAAGCTAT
CTGGTAAGCA GTTTTGACCT GAATTCACAG GTAGCCTTGC TGGAGAAGAA AAAACTGGAA
TACTATACGG TTACCCATGA CCTTACCGAA ATAAGTATAC GTGAAGTGTT GAAAAACAAA
TTGGTGGGGG ATATCAGTGT ATATCTGGGC AAAGTAGACG TTACTCTAAC GGTAACAGGT
TACAGACGCA AAGCCCAGTT TACCGAGCAG ATATTGAGTG AAGAACAGCT GGATTTGCCG
CCTCAAACCT TTCCCACTAT AGCGGTTTGG TTTAAACTGC CGGCTGAAAC AGTCCGTATT
ATGGAAAAAT ATAAAATGGA TTTTCACGGG GCTATCCACG CTGCCGAACA TGCCCTTATT
GGGCTTTTGC CTTTGTTTGC CTTGTGTGAC CGCAGTGATA TCGGGGGTGT TTCCACCCCC
CGTCACCCGG ATACGGGTAC TTCGGCAATA TTCATCTATG ACGGGCATCC CGGCGGGGTG
GGCATTGCCG AAAAAGGGTA CGAGATTATT GACCAGCTTT GGGAAACTGC CCGTAACCTT
ATTGATAAAT GTACCTGCGT AGATGGCTGC CCCAGCTGTG TCCAGTCCCC CAAATGCGGA
AATAACAATA AACCGCTGGA TAAAAACGGG GCAAAAACAG TGCTGGAAAG ATGCCTTGGC
AAAACCTGTT TGTGA
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| Protein sequence | METTEFLAYI ASLPDYQEQI AHIERLPYRP AEYAKPDAPL LPQIDARLRK KRILPLYTHQ
VTAVNLCRQG KNIIVATPAA SGKSLCYNLP VLEKLVSDPN ARALYLYPTK ALAQDQLRSL
KSFAVPSLLL AEEMDVYDGD TPNRNRSDIR LQARIILSNP DMLHVSILPS HQKWSRFLRH
LEYVVIDEAH IYRGVFGSHL ANIIRRLRRI CSYYGSSPKF ILSSATIASP GTHAQSLTGL
PFSVVDNDGA PRAEKDFIFW NPPIIDPANG MRHSANSESA FLLSELVSHE IRTLDFARTK
RLTELIYKYS RDRLIAIKPE FADLIKPYRG GYTAEDRRKI EKELFSGKLL GAVSTNALEL
GVDIGDLGAS ILTGFPGSIS STFQQAGRSG RRCGHSLSFL LGLDNPLDQY YMNNPERLFN
SGFESTFINP ENPYIYKAHL LCAAWEISLN ESETDIFGEN LAEELEILSE ERVLNKRRGN
YYISADISYP ARDVSIRSAS GKDFCLVDAQ SGQIIETLDY QTAFLQAYPG AVYLHQGESY
LVSSFDLNSQ VALLEKKKLE YYTVTHDLTE ISIREVLKNK LVGDISVYLG KVDVTLTVTG
YRRKAQFTEQ ILSEEQLDLP PQTFPTIAVW FKLPAETVRI MEKYKMDFHG AIHAAEHALI
GLLPLFALCD RSDIGGVSTP RHPDTGTSAI FIYDGHPGGV GIAEKGYEII DQLWETARNL
IDKCTCVDGC PSCVQSPKCG NNNKPLDKNG AKTVLERCLG KTCL
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