Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0846 |
Symbol | |
ID | 5131374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 833277 |
End bp | 834383 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640529762 |
Product | phage integrase family protein |
Protein accession | YP_001214306 |
Protein GI | 147669488 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGCC ACATAACCAA GCGAGGCAAG GATAGTTATT CGATTGTAAT TAGTACGGGT GAAAGAGATC CAGAAACTAA GAAATATAAA CAGCATTGGG AAACTGTAAG AGGCACCAAG AAAGATGCTG AAAAGAGGTT GGCAGAACTC CTGAACCAGA TAGACAAAGG ACTTTATATA AAACCGGAGA AGACTACTTT AGCAGAATAT TTGGAAAGAT GGCTAAAAGA CTATGTTTGG CCTAACCTTG CTCCCAGGAC AGCTGAAGGT TACGAGCATA TTATAAGAAG ATATATCATC CCTGGGTTGG GCAAGATCCA ACTAGCTCAA CTGAAACCAG AACATATCCA GAAGTATTAC GCGAACCAGC TATCAATCGG AGGAGATAAG GGAATAGGTT TAAGCCCCAG AACTGTAAGA CATCATCATA TGTGCCTTCA CAGTGCATTA AAAACAGCCG TTAAATGGGA ATTACTCATA CGTAATCCTC TTGATGCAAT AGATCCGCCA CGCTGCCAAA AACATGAAAT GCACACTTTA ACAGAAGAAG CAGTACACAA AGTATTGGAA ATAGCTAATG AAACTCCTTA TTTCACTTTA TTCTATCTTG CCTTATTCAC AGGTTTAAGA CGGTCAGAAC TTTTAGCCCT AAAATGGAGT GCTGTTGATC TCATTATGTG CCAACTTTCA GTAAGCCGTT CTCTTCATGT TTTATCCGGA GGCGAGATAA TTACAAGACA AACAAAGACC GCTAGAAGTA CACGATCTGT TGCCTTATCT CCCTCAACAG TACAAGTCTT GAAAGACCAT AGAGACAAGC AACAAGCATT CAAGATATTA GCTGGCTCAC ATTTAAATAA TGATGATTTT ATCTTTACTA ATATTGATGG CAAGCCATTA TTACCTAACA CAATAACTCA CAATTGGATT AAACTTATAC GAAAAACAGG ATTAAATGGC ATAAGATTAC ACGATGCCAG ACATACTCAT GCCTCACTTA TGTTAAAGCA AGGTGTCCAT CCAAAGATTG TGCAAGAGAG ATTAGGTCAT TCCAGCATCC AGGTAACACT TGATACTTAC AGCCATGTCA CCCCTGGACT TCAATAA
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Protein sequence | MRGHITKRGK DSYSIVISTG ERDPETKKYK QHWETVRGTK KDAEKRLAEL LNQIDKGLYI KPEKTTLAEY LERWLKDYVW PNLAPRTAEG YEHIIRRYII PGLGKIQLAQ LKPEHIQKYY ANQLSIGGDK GIGLSPRTVR HHHMCLHSAL KTAVKWELLI RNPLDAIDPP RCQKHEMHTL TEEAVHKVLE IANETPYFTL FYLALFTGLR RSELLALKWS AVDLIMCQLS VSRSLHVLSG GEIITRQTKT ARSTRSVALS PSTVQVLKDH RDKQQAFKIL AGSHLNNDDF IFTNIDGKPL LPNTITHNWI KLIRKTGLNG IRLHDARHTH ASLMLKQGVH PKIVQERLGH SSIQVTLDTY SHVTPGLQ
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