Gene DehaBAV1_0831 details

Gene Information

• Locus tag: DehaBAV1_0831
• ID: 5131318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 818933
• End bp: 820816
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640529748
• Product: thiamine pyrophosphate binding domain-containing protein
• Protein accession: YP_001214292
• Protein GI: 147669474
• COG category: [C] Energy production and conversion
• COG ID: [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
• TIGRFAM ID: [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCAGCAA CATATCAATC TTGCCTGATT GACAAGCCGA AAGCTATTGA TTATTCTAGA 
ACTATTATCC AACGGGAGAA CAAGGTCTTG AAAAAGCTAT TATCCGGCAA TGAAGCTTTA 
GCCTTAGGCG CATATGACGC AGGTCTTAAA CTGGCCGCTG CCTATCCCGG CACTCCCAGT 
ACCGAAATAA TGGAAAATCT GGCTAAATTT CCAGATATAC ATACCCAGTG GTCATCTAAC 
GAAGCCGTAG CCGTAGAAGT AGCTACCGGT GCATCGTACA CCGGGGTACG GGCACTGGCT 
GCCATGAAAC ACGTAGGCCT CAATGTAGCC GCCGATGCGT TTATGGCTGT TTCCACCACC 
GGTGTAAAGG GTGGATTAGT AATAATAGTA GCAGATGACC CCGGCATACA TTCATCCCAG 
AACGAACAGG ATACCCGCCA CTATGCACAT CTTTCAAAAA TGCCGGTGCT TGAGCCGTCA 
AACAGCCAGG AGGCTTATGA TTATATGGCT CTGGCATTTG AGCTAAGCCA ACATTTTGAC 
ACTCCGGTAA TTCTGCGCAG TACTACCCGT GTTTCCCATT CCAGTTCTCT GGTAGAAACC 
CTCTCCGAAA GACAGGTACC TACCCTGCCA AGCTTCAAAC ACGACGCCTC TAAACTGGTT 
ATGGTACCCA CCGCTGCCCG CATGCAGTGG CCGAAGGTAC TTAAACGGGA AGAACTGATA 
GGCGAATATG CCGAAACCTG CCCCTTTAAC AAATACATAC CCGGAAATGC CAAACTGGGT 
ATTATAAGCA GCGGCATTGC TTTTCAGTAT GCCAGAGAAG TTTTCCCTGA AGCTTCTTTC 
CTGAAGCTGG GTATGACTTT CCCTTTGCCA AAAAACCTTA TACAAGAATT CAGCCAGAGT 
GTTGAAACTA TATTTGTTGT AGAGGAACTG GATTCAGTTA TTGAAGATGC TCTCTGCCGC 
ATGGGTATTT CGGCAATAGG CAAAAAATAT GTACCCCGCA GCGGCGAACT GAACCCGGAT 
ACCATCCGTG CTTCTGCCGT AAAGGCAGGC ATACTGCCTG AACCAAAAGA TATTCTGTTT 
AAACCTGCCA CTTCAGACTT TCCCAAGCGG CCGCCGCTTT TATGTGCCGG TTGCCCGCAT 
ACCGGCGTAT TTTTTACCCT TAGCACACTG GGGCAGCGTT CGGCTCTGCC CGGCAAACCC 
AAACGTGAGC CCAAGCTGGT ACTTGCAGGT GACATAGGCT GTTACACTCT GGGTGCTTAC 
CCCCCGCTTT CAGCTATGGA TACCTGTGGC TGCATGGGCG GAAGCATCAG CCAGGCGGTA 
GGTATGGAAA AATCGGGCCT GACCGAGCCA GTTATAGCCA TTATAGGTGA CTCCACCTTT 
ATGCATTCCG GTATAAATGG TCTAATTAAT GCGGTTTATA ACCAGTCACG GATAACCATA 
CTTATACTGG ATAACCGCAC CACCGCCATG ACCGGCCATC AGGGAAACCC CGGTTGCGGT 
ATTTCCGCAA GTGGTCAAAC AGTTACCGAA GTGAATCTGG AAGAACTGGT AAAGGGAGCG 
GGCATAAAAA ACCTCCAAAT TATCCCTGCT TTTGACCTGA AATCCCTAAG AAACGGGCTG 
AAGAATGCGA TATCCAGCGG GGAACTGAAT GTGATAATTG TACGCGGGGA ATGCAATGTA 
ATCTGCCGTA AACGTTCCTT GCCCAATATT ATAGACACCG GCCTGTGCAA CCGCTGTGAC 
GCCTGTCTTC TTTTAGGCTG TCCGGCTATC CAGCGTGAGG GTGATAAGCT ATTTATAGAC 
CCGGGTCTTT GTACCGGCAA TAACTGCAAC CTATGCCATC AGGTCTGCCC CCAAAAAGCC 
ATTAAAACCA ATGAGGCGGC GTAA 

 

Protein sequence

MSATYQSCLI DKPKAIDYSR TIIQRENKVL KKLLSGNEAL ALGAYDAGLK LAAAYPGTPS 
TEIMENLAKF PDIHTQWSSN EAVAVEVATG ASYTGVRALA AMKHVGLNVA ADAFMAVSTT 
GVKGGLVIIV ADDPGIHSSQ NEQDTRHYAH LSKMPVLEPS NSQEAYDYMA LAFELSQHFD 
TPVILRSTTR VSHSSSLVET LSERQVPTLP SFKHDASKLV MVPTAARMQW PKVLKREELI 
GEYAETCPFN KYIPGNAKLG IISSGIAFQY AREVFPEASF LKLGMTFPLP KNLIQEFSQS 
VETIFVVEEL DSVIEDALCR MGISAIGKKY VPRSGELNPD TIRASAVKAG ILPEPKDILF 
KPATSDFPKR PPLLCAGCPH TGVFFTLSTL GQRSALPGKP KREPKLVLAG DIGCYTLGAY 
PPLSAMDTCG CMGGSISQAV GMEKSGLTEP VIAIIGDSTF MHSGINGLIN AVYNQSRITI 
LILDNRTTAM TGHQGNPGCG ISASGQTVTE VNLEELVKGA GIKNLQIIPA FDLKSLRNGL 
KNAISSGELN VIIVRGECNV ICRKRSLPNI IDTGLCNRCD ACLLLGCPAI QREGDKLFID 
PGLCTGNNCN LCHQVCPQKA IKTNEAA