Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0797 |
Symbol | |
ID | 5131403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 787770 |
End bp | 788291 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640529714 |
Product | rubrerythrin |
Protein accession | YP_001214258 |
Protein GI | 147669440 |
COG category | [S] Function unknown |
COG ID | [COG1633] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAC GTTTTATGGT ATTACCTGAA AGCAAATTTT CTTGTACACC AGAAAGGATT TTACCAGTGA GTGAAGAATT AAAAGAACTA ATTGAAGCGG CTATATACAA GGAAGTTGCT TCCCAGTCAC TTTACCAGTT CGCCATACAA AAAACGGATG ACGACGCAGT CAGGCAGCTG CTTAATTCTC TGATACAGAG CGAAGAAAAC CATCTGAAAG TACTTAAAGA TTTGTTGGTC AAAGGTGAAT TCAAACCAAA AGCAGTCACA CTCCGCTTGC AGTCTCTTAA ACTGGATACT TATGTAACAG GTGGTAACCA GTTGGAAGGA GCAGACCTGC AAAATATTCT TCTTTATGCC ATCAAAGAAG AACAATCTTC TTCGGAATTT TATTCCCACC TGATGTCTAC TTTTATTAAC CAGGAAACCA AAAATATGTG CCGGGTCTTG GCTTCCGAGG AACTGGAACA TAAACTGAAG CTGGAGTTGA TTTATGATGA TCTGTTTTTC TTTGAAAATT AG
|
Protein sequence | MKKRFMVLPE SKFSCTPERI LPVSEELKEL IEAAIYKEVA SQSLYQFAIQ KTDDDAVRQL LNSLIQSEEN HLKVLKDLLV KGEFKPKAVT LRLQSLKLDT YVTGGNQLEG ADLQNILLYA IKEEQSSSEF YSHLMSTFIN QETKNMCRVL ASEELEHKLK LELIYDDLFF FEN
|
| |