| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0793 |
|---|
| Symbol | |
|---|
| ID | 5132219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 783000 |
|---|
| End bp | 784274 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640529710 |
|---|
| Product | arsenical pump membrane protein |
|---|
| Protein accession | YP_001214254 |
|---|
| Protein GI | 147669436 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTGGT TAGCCTTATC AATATTTATA GCCACCATTT TATTGGTGAT TTTTAAACCT
CGGCCCTTTA ATGAAGCCGG GGCTATTTGT TTAGGCGCCA TTATTATGCT TATTCTGGGG
CTTGTCCCCC TTTCAAACAT CAGCCAGATT TTTTCTGCTA ATCTGAATAT CCTGCTATTT
TTCCTTGGGC TTATGCTAGT AAGTTATTTC GCAGATTTAT CCGGCTTTTT CAATTCGGCT
GTCAATCTGG CTCTAAAACT GTCTGGTGGC AGTTCGTGGC GTTTGCTGGG TTTGGTTTTT
GCTCTTGGCA TAGTTATTAC CATGTTTATG TCAAATGACG CTACTGCCCT GCTCCTGACT
CCTGTAGTTT TTATGCTTGT TAGCCGCTAT GGCTTGAAAC CTTTGCCGTA TATATTTGCC
TGTGCCTTTG TAGCAAATAC GGCATCATTT ATTTTCCCAT TTTCCAATCC GGTCAATCTG
CTGGCGGTAG ACAAGTTTAA TCTGAGCCTT GGGGAATACA CTACTTACAT GTTAATACCC
AGCATACTGG CTATCACGAT TACTATAGCC ATATTTTATG TTGTCTTCAG ACATGATCTT
AGAACAGGGC TTTCGCTTGT GGAGACTAAA GCTGTTGCCT CAGACAGGTT TTCACGCTCC
GTCAGGCTGG TACTAATTTT TCTGGCGGCA GCTTGTCTTT TTACTTCGTT TATGGGGTGG
CCACTGGCAA TACCTCTGGT ACTTACTGCT TTTATACTGC TGGGCATAAC TTCATTTTAT
AAAAAATTGG ATTTTAACCA CTTGAAGCAT TCGGTTGCTT GGTCAATACT GCCATTTGTA
CTTGGTCTGG CATTTATGGT AAACGGACTC GAAAATACAG GGCTTACTGC AACATTGGGT
AACTTTCTTT CAAATACTCT GGCTGATGGA GGCCAGCTGG AAGCTGGTTT GATTACTTCT
TTTGGTACAG CTATCGGATC TAACCTTATA AATAATTGGC CGATGATGAT GGTCTCGGTA
TCCAGCCTGT CGGCTGTCAG TGACATTGGC GGGGCCAATT CAGGTTTGAT TTATCAAGCT
ATTTTGGGAG CAGACTTGGG TCCTAATCTG CTTATAATGG GCTCTTTGTC TACCATGCTC
TGGTTGATAC TTCTGCGCAA ACGGGGGCTG GCAATAAAGC CCATGGAATT TACAAAACTG
GGGCTTACAA TCACCCCTCT GGTTCTTCTG GTATCAACAT TGGCCATATT TCAGTTAGGG
AAATTGAGTA GTTAA
|
|---|
| Protein sequence | MLWLALSIFI ATILLVIFKP RPFNEAGAIC LGAIIMLILG LVPLSNISQI FSANLNILLF
FLGLMLVSYF ADLSGFFNSA VNLALKLSGG SSWRLLGLVF ALGIVITMFM SNDATALLLT
PVVFMLVSRY GLKPLPYIFA CAFVANTASF IFPFSNPVNL LAVDKFNLSL GEYTTYMLIP
SILAITITIA IFYVVFRHDL RTGLSLVETK AVASDRFSRS VRLVLIFLAA ACLFTSFMGW
PLAIPLVLTA FILLGITSFY KKLDFNHLKH SVAWSILPFV LGLAFMVNGL ENTGLTATLG
NFLSNTLADG GQLEAGLITS FGTAIGSNLI NNWPMMMVSV SSLSAVSDIG GANSGLIYQA
ILGADLGPNL LIMGSLSTML WLILLRKRGL AIKPMEFTKL GLTITPLVLL VSTLAIFQLG
KLSS
|
|---|
| |