| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0765 |
|---|
| Symbol | |
|---|
| ID | 5131954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 754563 |
|---|
| End bp | 755801 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640529680 |
|---|
| Product | histidine--tRNA ligase |
|---|
| Protein accession | YP_001214226 |
|---|
| Protein GI | 147669408 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGC GTTGTAAAGG TTGCAGCGAT TTATTGCCCG AAGATATGCT TCGGTTCAGG
TATATAGAGA GCATTTTCCA TGACAGTTGC ATCACCTGGG GATACGAAGA AGTGCGTACC
CCCATGCTTG AATATCTGAG TCTGTTTACT TCCAGCGGCA CACTTACCCC CCAGATGTTA
AAAAGGGTGT ATTCCTTTTT GGATTGGGAC GGCTGGAGCG GTGAAAGAGT GGTTTTACGC
CCGGATGGCA CTATACCTGC TGCCAGACTG TATATTGACA GCCTGCAGGA AATGGATGTT
GCCCGTCTTT GTTACACCTC CAATATTTTC CGTTTTGATG AAACGGGCAA AAAATCCCGC
GAAAACTGGC AACTGGGAGC TGAACTGATA GGGGTTACCA GCCCTGAAGC CAATGCCGAG
CTGATTACGC TGGCGCTGGA AACCCTTGCT AGACTGGGTT TTGAAGACGT GGAGCTAAGG
CTTTCACATG CCCAGCTTAT AAAAGCGGTG CTGGCCCAGC TTGAGCCGAA TGCTGATGAA
CAGCATAAAA TATTTGACCA GCTGCTGGAC GGAGATATTG CCCTGATGAG CAGGCTTGAA
ACCGAAAAGC CAGAACTTTT CCGCACCCTG AAACTGCTTA TGGAAAATAA AGGCACTTCA
GCCTCTTTCC TGAAAAATGT GATGGCCATG GCCGGTACCG CAGGCGGCGA GCTGGAAGAA
CCCCTTAATG ATTTCATTGC CGGGGTGGAC GTGCTGGATA AACTGGGTGT CAGCTATCAG
ATAGACCTTG CATCCGGCAA GGGTTTTGAA TACTATACCG GTGTAATTTT CCACCTGTTT
GTAAACGGCG AACATGTAGG CGGCGGCGGC CGCTATGATA AACTGATACC TCTGCTGGGC
GGACCTGATA AGCCGGCGGC CGGGTTTGCT TTGTATCTGA ACCGTCTTAT CCCCATGATA
GATGCTGAAG ATATGTACGA TATGGTTGAA GAAAAGATAC TTATTAAATA CCAGGGTGAT
AACCTTAAGA CTGCTTATGA AATAGCTAAC CTTATCCGCG AGTGCGGTAT AAGCGCCGAG
CTTTTTTACC CCGGTGTGGA TACGGCAGCC TATGGCTGGG CAGTAACCGT CAAAGCTGAA
GACTGCTACG AGGTAACAGA CCTGATTGAA GACAAAACTT TAGAGCTTAA AGAACAGTCT
GAGGTTATTT ACTTGTTAAA CGGTGAAGAA GATGCTTAG
|
|---|
| Protein sequence | MIARCKGCSD LLPEDMLRFR YIESIFHDSC ITWGYEEVRT PMLEYLSLFT SSGTLTPQML
KRVYSFLDWD GWSGERVVLR PDGTIPAARL YIDSLQEMDV ARLCYTSNIF RFDETGKKSR
ENWQLGAELI GVTSPEANAE LITLALETLA RLGFEDVELR LSHAQLIKAV LAQLEPNADE
QHKIFDQLLD GDIALMSRLE TEKPELFRTL KLLMENKGTS ASFLKNVMAM AGTAGGELEE
PLNDFIAGVD VLDKLGVSYQ IDLASGKGFE YYTGVIFHLF VNGEHVGGGG RYDKLIPLLG
GPDKPAAGFA LYLNRLIPMI DAEDMYDMVE EKILIKYQGD NLKTAYEIAN LIRECGISAE
LFYPGVDTAA YGWAVTVKAE DCYEVTDLIE DKTLELKEQS EVIYLLNGEE DA
|
|---|
| |