Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0749 |
Symbol | |
ID | 5131358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 736559 |
End bp | 738076 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529665 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001214211 |
Protein GI | 147669393 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGAA TAAAGATTTT TGATACCACC CTCAGAGATG GAGAACAAGC AGCCGGTGCT TCTTTAAATG CACAGGAAAA GCTGGAGATA GCCCGGCAGC TTGAAAAACT GGGGGTGGAT ATCATTGAAG CAGGCTTTCC CATCACCTCG CCGGGTGATT TTGAAGCCGT AAAGCTGATA GCCCAAGAAG TACGCACCCC TGTTATCTGT GGTTTGGCCA GAGCTATACC TGCAGATATT GACCGTGCCT GGGAAGCTTT GAAAGAGGCT GCCCATCCCC GGATCCATGT GTTTATTTCT TCATCTGAAA TACACATGGT TCACCAGATA AAAAAGAGCC GTGACGAAGT GCTGGAGCTG GCGCGCACTA TGGTAGCCAA AGCCAAAGGC TACACTGATG ATATAGAGTT TTCGCCCATG GACGCCAGCC GCTCTGACCC GGAGTTTCTG TATAAACTGC TTGAAGCAGT TATCGATGCC GGGGCTACCA CCCTGAATAT ACCTGATACC GTTGGTTATG CTATTCCCAG TGAATTCGGT GAACTTATAA AAGGTATCCG CCAGAACGTG CCCAATATAG GCAAAGCGGT TATAAGCGTG CATTGCCATG ATGATTTGGG TATGGGCACA GCCAATTCGC TGGCGGCAGT TAAAAACGGT GCCCGTCAGG TGGAATGCAC CTTGAATGGC ATAGGTGAAC GGGCCGGCAA TGCCGCACTT GAAGAAGTAG TGATGGCACT GCGTACCCGA AGCGACTTTT TTAATTTTGA AACAGGTATA AACACACAGG AAATATACCG CACCAGCCGT CTGGTCAGTG CTCTTACCGG TTTCGCCATT CAACCCAACA AGGCAGTTGT GGGTGAAAAT GCTTTCCGCC ACCAGTCCGG TATTCACCAA GACGGCGTTA TTAAAATGGC TAAAACGTTT GAAATTATGG ATCCCAAGGA AGTGGGTATT CAGGCATCCA GTTTGGTATT GGGCAAGCTT TCAGGCCGCC ATGCTTTCAA ACAGCATCTG ACTGAACTGG GCTTTGACCT GAACGAAGAA GATTTTGATC GTGCTTTCAA AGCATTTAAA GATTTGGCAG ACAAAAAGAA GGACGTAACT GACCGGGATA TAGAAGCTCT GGTTGCCGAA GAACTGCGGA CTACAGTTGA ACTTTATCAT CTTGACCGCA TACAGGTTAC CTCCGGAGAC AGGGGCATAC CCACCGCCGC AGTGCGTCTG ACTACCCCGA ATGGGGGAGC TGTTGAAGAT GCCTCTTTGG GCAGCGGACC GGTAGATGCC GTTTACAAGG CCATAAACCG GATAGTAAAC GTACCTAACA AACTGACTGA GTTTTCGGTT AAGTCTGTTA CGGCCGGTAT TGATGCACTG GGTGAAGTGC TTATCCGTAT TGAAAGTGAC GGTGTGACCT ATACAGGACG CGGGTCCGAT ACAGATATAA TAGTAGCCAG TGCCAAGGCC TATATGAATG CCTTGAACCG CTTGCTTAGG GTTAAGAACG CATCTTAA
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Protein sequence | MDRIKIFDTT LRDGEQAAGA SLNAQEKLEI ARQLEKLGVD IIEAGFPITS PGDFEAVKLI AQEVRTPVIC GLARAIPADI DRAWEALKEA AHPRIHVFIS SSEIHMVHQI KKSRDEVLEL ARTMVAKAKG YTDDIEFSPM DASRSDPEFL YKLLEAVIDA GATTLNIPDT VGYAIPSEFG ELIKGIRQNV PNIGKAVISV HCHDDLGMGT ANSLAAVKNG ARQVECTLNG IGERAGNAAL EEVVMALRTR SDFFNFETGI NTQEIYRTSR LVSALTGFAI QPNKAVVGEN AFRHQSGIHQ DGVIKMAKTF EIMDPKEVGI QASSLVLGKL SGRHAFKQHL TELGFDLNEE DFDRAFKAFK DLADKKKDVT DRDIEALVAE ELRTTVELYH LDRIQVTSGD RGIPTAAVRL TTPNGGAVED ASLGSGPVDA VYKAINRIVN VPNKLTEFSV KSVTAGIDAL GEVLIRIESD GVTYTGRGSD TDIIVASAKA YMNALNRLLR VKNAS
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