Gene DehaBAV1_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0738 
Symbol 
ID5132310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp727013 
End bp727666 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content47% 
IMG OID640529654 
Productthymidylate synthase-like protein 
Protein accessionYP_001214200 
Protein GI147669382 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.912305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CCTCGGTGGA AGCCAGAGAT CTCTCTGAAG CCTGGTTTTT GTGCCTGAGA 
CAGGTACTTA CAAACGGTTA CGAGTACACT ATTGAACGTG GCAGTTATTC AGGGCAGAAA 
CGCAAAGAAC TGGATATGAT AACTGTCCAT ATTAAAAACC CCGGTAACCG CCCCCTTATA 
CCTGATGTTC CACCCGGTGT GCCCGCTCCA TCCACTATGG AATATATAGA TAACTATCTG 
CCGTACCTGA TGACTGCTCA CCGGGCAGAG GGTGAGCAGT ATACCTATGG CCAGTATCTT 
GAAGCCCAGA TTGCCAAAGT TATAAAAATG TACCGGGAAA CAGGCTTCAA TACCAATCAG 
GCTTTTATGA CAGTAGGCAA TCCCGAAACA CTGGACTTGG AGGACCCCCC TTGTCTTCGC 
AGTATAGATA CCAGAGTACG TTACGGAAAA CTCCACTTTA TAATATATTT CCGCTCATGG 
GATTTATGGG CAGGCTTCCC GTCTAATCTG GCGGCTATCC AACTGCTAAA AGAATATATG 
GCAGCCGAAA TAGGGGTAGA AGACGGGGAG ATTATCGCCA TGAGCAAAGG CATGCATATT 
TACGATTATG CCTGGGATAT AGCCAAAACG GCCGCCGGCA TGAATGGCGT TTAG
 
Protein sequence
MKITSVEARD LSEAWFLCLR QVLTNGYEYT IERGSYSGQK RKELDMITVH IKNPGNRPLI 
PDVPPGVPAP STMEYIDNYL PYLMTAHRAE GEQYTYGQYL EAQIAKVIKM YRETGFNTNQ 
AFMTVGNPET LDLEDPPCLR SIDTRVRYGK LHFIIYFRSW DLWAGFPSNL AAIQLLKEYM 
AAEIGVEDGE IIAMSKGMHI YDYAWDIAKT AAGMNGV