Gene DehaBAV1_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0734 
Symbol 
ID5131233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp723080 
End bp723805 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID640529649 
ProductABC-2 type transporter 
Protein accessionYP_001214196 
Protein GI147669378 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00105629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TGCTGGCTAT TGCCCAGAGG CTTATCCGCC AGTTACTCCA TGACCGCAGG 
ACTATGGCAC TCATAATAGT AGTTCCGGTG GTGGTTATGG GGCTTATAGG TGTCAGTTTT
CCGGATGCAA CGGTGCTTGA TTATATTGCT CCGGCCATGC TGGCGACTCT GGCTTTGTTT
TTCAGTTTCC TGCTTACCGG CATTTCATTT CTGCGTGAAA CATCTCAGGG TACTATGGAA
AGACTTATGG CCGCGCCTGT TTCCCGTCTG GATATAGTAG CCGGGTATCT TCTGGGGTTT
TTTGTGTTTG CCTTGCTGCA GACACTTATC ATTGTTCTTT TTACTATATA TGTGCTGGGT
GTTAACTTTC AGAGTGAACT CTGGCAAATA CTCCTCTTTC AGGTGCTTAT TATTACCGGT
GCAGTTACAC TGGGTATTTT TACCAGCAGT TTTGCCAAAA ATGAGTTCCA GATGGTTCAG
TTCATTCCGC TCATTATTGT TCCCCAGATA TTTCTGTGCG GGGTTATCTG GCCGGTTTCT
CAAATGCCGG AGTGGCTTCA GTACCTGTCA AATATTCTGC CATTAACCTA TGGTGTGGAC
GGCATGCGTG AAATAATGCT GGAGGGTAAA AATCTGGCTG AAGTAGGATT TCAATGCGGA
GTTTTGATGC TGTTTGCGGT TATTACCACT CTTTTGGCTT CACTTACCGT ACCCAAACGC
CGCTAA
 
Protein sequence
MNNMLAIAQR LIRQLLHDRR TMALIIVVPV VVMGLIGVSF PDATVLDYIA PAMLATLALF 
FSFLLTGISF LRETSQGTME RLMAAPVSRL DIVAGYLLGF FVFALLQTLI IVLFTIYVLG
VNFQSELWQI LLFQVLIITG AVTLGIFTSS FAKNEFQMVQ FIPLIIVPQI FLCGVIWPVS
QMPEWLQYLS NILPLTYGVD GMREIMLEGK NLAEVGFQCG VLMLFAVITT LLASLTVPKR
R