Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0734 |
Symbol | |
ID | 5131233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 723080 |
End bp | 723805 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640529649 |
Product | ABC-2 type transporter |
Protein accession | YP_001214196 |
Protein GI | 147669378 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00105629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA TGCTGGCTAT TGCCCAGAGG CTTATCCGCC AGTTACTCCA TGACCGCAGG ACTATGGCAC TCATAATAGT AGTTCCGGTG GTGGTTATGG GGCTTATAGG TGTCAGTTTT CCGGATGCAA CGGTGCTTGA TTATATTGCT CCGGCCATGC TGGCGACTCT GGCTTTGTTT TTCAGTTTCC TGCTTACCGG CATTTCATTT CTGCGTGAAA CATCTCAGGG TACTATGGAA AGACTTATGG CCGCGCCTGT TTCCCGTCTG GATATAGTAG CCGGGTATCT TCTGGGGTTT TTTGTGTTTG CCTTGCTGCA GACACTTATC ATTGTTCTTT TTACTATATA TGTGCTGGGT GTTAACTTTC AGAGTGAACT CTGGCAAATA CTCCTCTTTC AGGTGCTTAT TATTACCGGT GCAGTTACAC TGGGTATTTT TACCAGCAGT TTTGCCAAAA ATGAGTTCCA GATGGTTCAG TTCATTCCGC TCATTATTGT TCCCCAGATA TTTCTGTGCG GGGTTATCTG GCCGGTTTCT CAAATGCCGG AGTGGCTTCA GTACCTGTCA AATATTCTGC CATTAACCTA TGGTGTGGAC GGCATGCGTG AAATAATGCT GGAGGGTAAA AATCTGGCTG AAGTAGGATT TCAATGCGGA GTTTTGATGC TGTTTGCGGT TATTACCACT CTTTTGGCTT CACTTACCGT ACCCAAACGC CGCTAA
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Protein sequence | MNNMLAIAQR LIRQLLHDRR TMALIIVVPV VVMGLIGVSF PDATVLDYIA PAMLATLALF FSFLLTGISF LRETSQGTME RLMAAPVSRL DIVAGYLLGF FVFALLQTLI IVLFTIYVLG VNFQSELWQI LLFQVLIITG AVTLGIFTSS FAKNEFQMVQ FIPLIIVPQI FLCGVIWPVS QMPEWLQYLS NILPLTYGVD GMREIMLEGK NLAEVGFQCG VLMLFAVITT LLASLTVPKR R
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