| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0727 |
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| Symbol | panB |
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| ID | 5131353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 716154 |
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| End bp | 716993 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640529638 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001214189 |
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| Protein GI | 147669371 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0306792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACCA CTATCAGCCA ACTTAAAGAA ATGAAACAAA ACAAACAGAA GATAGCCATT
TTGACTGCTT ATGACTATCC CACTGCCCAA ATACTGGATA AAGCCGGTAT CCCGGCCATA
CTGGTAGGAG ACAGTCTGGG TATGGTAGTG CTGGGGTATG ATTCTACCGT AAGCGTTACT
ATGGAAGATA TGCTGCACCA TCTGAAAGCC GTAGTCAGGG GCAGTCAAAA AGCCCTGATT
ATAGCAGATA TGCCATTTAT GACCTACCAT CTGAGTCCGG AACAGGCGCT GTTAAATGCC
GGTCGTTTTA TTCAGGAGGG CGGTGCTCAG GCAGTCAAGC TGGAGGGTGG AGTAAATGTG
GCTGACAAGG TTAAAAGAAT AGTAGACTGC GGTATACCTG TTATGGGGCA TATCGGACTT
ACCCCCCAAT CTGTAAACCA GTTAAGCGGA TTTAAGGTGC AGGGGAAAAC TCTGGCAACT
GCCCTATCCC TTATAGAAGA TGCCAAGGCT CTGGAAAAAG CCGGGGCCTT TGCAATAGTG
CTGGAGACTA TGCCGGCTGA ACTGGCGGCT ATTATTACAG CCGGTATTTC CATACCTACC
ATAGGTATAG GTGCCGGAGA AGAATGTGAC GGGCAGGTAC AGGTGATATC AGATATGCTG
GGTATGTTTA CTGATTTTAT ACCCAAGCAC ACCAAACGGT ATGCTGATTT AAATGGCATT
ATTACAAAAG CTGTATCTGA ATATGCCGCT GAAGTCACTA AAGGTGCGTT TCCCACTTTA
AAGGAGAGCT TCACCCTTGA TAAAAAGGTA CTGGAGGAAC TGAAAAAGTG CGTATTATAA
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| Protein sequence | MRTTISQLKE MKQNKQKIAI LTAYDYPTAQ ILDKAGIPAI LVGDSLGMVV LGYDSTVSVT
MEDMLHHLKA VVRGSQKALI IADMPFMTYH LSPEQALLNA GRFIQEGGAQ AVKLEGGVNV
ADKVKRIVDC GIPVMGHIGL TPQSVNQLSG FKVQGKTLAT ALSLIEDAKA LEKAGAFAIV
LETMPAELAA IITAGISIPT IGIGAGEECD GQVQVISDML GMFTDFIPKH TKRYADLNGI
ITKAVSEYAA EVTKGAFPTL KESFTLDKKV LEELKKCVL
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