| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0714 |
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| Symbol | |
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| ID | 5131078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 703932 |
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| End bp | 705179 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640529625 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001214176 |
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| Protein GI | 147669358 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATTC TCCACTTTGC AGATCTGCAC ATAGGGGTGG AGAATTATGG CCGTTTTGAC
AGTGCAACCG GGCTTTCCTC CCGGTTGGCT GATTTTTTAA CTGCGTTTGA TCGTTTGGTA
GCATATGCCA TTGATAAAAA AGTGGATCTG GTGGTTTTCA GCGGAGATGC TTACAAGAGC
CGTGACCCCT CCCAGACCCA GCAACGGGAA TTTGCCCGCC GTGTAAGTAC TCTGGCAAGT
AGCGGTATTC AGGTGTTTTT ACTGGTGGGC AACCATGACC AGCCTAATGC TGCCGGGCGG
GCTACTACTA CCGAAATATT TGATACTCTG GATATTGCCA ATGTGCATGT TTCCGGCAAG
GCCGAGGTGC GTTTGATAAA TACCCGAAAC GGACCTATTC AGATAGCTTC CCTGCCATGG
TTACGCCGTT CATCTGTTCT TTCAGTATCA AACCAAAAGG AAGAAAAGAA CTTAAGCATT
GAGGAACTGA ACCAGAGGGT GGAGAGCTAT CTGGCAGGTA TTATAGAAAA TCTGGCAGGC
CAGCTTGATA AAAATATACC GTCCATTCTC TCTGCTCATC TTTCGGTCAA TACTGCCAAA
GTAGGTTCAG AGCGGAATAT TTCCATAGGG CATGAACCTA CAGTTATGTT AAGCAATATT
GCCAACCCTG CTTTTGATTA TGTTGCCTTG GGGCATATTC ATAAACAGCA GGTCTTGTCT
TCTGCCCCTC CGGTTATTTA CCCCGGCAGT TTGGAAAGGC TGGATTTTGG TGAGGAAAAA
GATGATAAGG GTTTTTATCT GGTTGAGATA GACCCGCTAA GCCATAAAAC TGATTTTGTG
TTTATAAAGC TGGAAGGCCG CCGTTTTCTG ACTATAGAGC TGAATCTGAA CGCTGACAGT
CTTGACCCCA CGCTGGAAGT AATAAATATA TTACAGGCAA GGCAACAAGA TATAAAAGAT
GCCATAGTCC GCTTGAAACT GGAGTTGCCG GCGGAGATTG GCGGGCAACT GCGGGATAGC
GATATAAGAG AAGCTCTTCG CGAAGCTCAC AATTTCACTA TCTCTAAAAA TGTTATAAGA
TTAACTCGCC AGAGGGCAGA TGGCTTCAAG GTGGAAGGTC TGGATCCTAT TCAGGCCTTG
GAACATTATC TGGAAATAAA GCAAACATCC GCACAGGAAA AGAAGACCCT GCTGGAATAT
GGCCGCAGGC TCTACAGTAC ACTGGATAGC AAGCAGACAA AAATTTAA
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| Protein sequence | MKILHFADLH IGVENYGRFD SATGLSSRLA DFLTAFDRLV AYAIDKKVDL VVFSGDAYKS
RDPSQTQQRE FARRVSTLAS SGIQVFLLVG NHDQPNAAGR ATTTEIFDTL DIANVHVSGK
AEVRLINTRN GPIQIASLPW LRRSSVLSVS NQKEEKNLSI EELNQRVESY LAGIIENLAG
QLDKNIPSIL SAHLSVNTAK VGSERNISIG HEPTVMLSNI ANPAFDYVAL GHIHKQQVLS
SAPPVIYPGS LERLDFGEEK DDKGFYLVEI DPLSHKTDFV FIKLEGRRFL TIELNLNADS
LDPTLEVINI LQARQQDIKD AIVRLKLELP AEIGGQLRDS DIREALREAH NFTISKNVIR
LTRQRADGFK VEGLDPIQAL EHYLEIKQTS AQEKKTLLEY GRRLYSTLDS KQTKI
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