Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0711 |
Symbol | |
ID | 5131474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 701311 |
End bp | 701964 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640529622 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001214173 |
Protein GI | 147669355 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCCAAA ATATTATCCT TGAGGCTTAT ACAAACATGC TTAACCGCAA ACTCCGTTTA GGTTTACTGG GTACAAACTG CTATATACTG GGTGATGAAG AAAGCCGCCA TGGGCTTATA ATAGACCCGG CAGCTATTTC AGATTCCATA CCCGAAACAG TTACTGAATA TCACCTTGAT GTAAAATATA TCTTACTTAC CCACGGGCAT CTTGACCATT TGGCAGGGCT GGAATATGCA AGAAAACTTT ACCCGGAAGC TAAACTGTGT TTTCACCCGG CAGATGCCAG TTTAAGTGAA AACGTTGAGC TGATAAGTTA TTTGGGAATG TCCGCCTTGC CAACTCTTGC ACCTGATATC CCGCTAAGCG AAGGCAGTAC GCTGGAACTA GGTAAAATCA AATTTTCGGT TATTTCTATC CCCGGTCATA CACCGGGTGG TATCTGCCTG TATACTAGGG GCTATTTATT CAGCGGAGAC ACCCTTTTTA ACTCAGGCAT AGGGCGGTCA GATTTTGAGG AAAGTGATAC CGAGGCCTTG CGGCAGAATA TAATAAACAG GCTGCTCAGC CTTCCCCCTG AAACCCTAGT CTTCCCCGGA CACGGCCGGG AAACAACTAT CGGCAAAGAA AAGACCGGCA ACCCGTTTAT TTAG
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Protein sequence | MCQNIILEAY TNMLNRKLRL GLLGTNCYIL GDEESRHGLI IDPAAISDSI PETVTEYHLD VKYILLTHGH LDHLAGLEYA RKLYPEAKLC FHPADASLSE NVELISYLGM SALPTLAPDI PLSEGSTLEL GKIKFSVISI PGHTPGGICL YTRGYLFSGD TLFNSGIGRS DFEESDTEAL RQNIINRLLS LPPETLVFPG HGRETTIGKE KTGNPFI
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