| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0686 |
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| Symbol | |
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| ID | 5131797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 678596 |
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| End bp | 679255 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640529596 |
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| Product | 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase |
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| Protein accession | YP_001214148 |
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| Protein GI | 147669330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4359] Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01489] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.158801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTT CTCATAACCC GAAACTAATG TTTCAGAGTG ATTTTGACGG CACCCTTACC
GAAGGGGATG TAAGCTTTTT AATACTTGAG AAATATGCTC AAGGTGATTG GTGTGCCATT
TTACGCGAGT ATCAACAAGG CAAAATAAGT GTGGGTGATT TTAACTACAG GGCTTTTGCA
CTGGTAAAGG AAGACAGGGA AACACTGGTT GAATTTATCC GCAAGAATGC CGTACCCAAG
AAAGGCATAT ATGAACTTAT CAATTACTGC CGCCAGGAAA ATATCCGCTT TTCGGTGGTA
AGCAATGGAT TAGACTTTTA TATTCATACC ATGTTGGAAG AACTGGGATT TAAGGATATT
GAGATAAACG CTGCCCGTAC ACTTTTCACC AGTAACGGGC TGGATGCCCG CTATTACGGC
CCCGACGGCA AAATGGTGGA GAATGGTTTT AAGGAAAGCT ATACCAATCA TTTTATCTCA
CAGAACTATC AGGTCATTTA TGCAGGCAAC GGCCCTTCGG ATTTCCCACC CGCCAAGCTT
TGTGAATATA CTTTTGCTAC GGATATGCTT CTAGACCGCT TTAAACAGAG CAATTTACCC
TGTTATCCGT TTCAAGACCT GCATGACGTT GTATCCCGTC TGAAAACAAT ACCCCGCTAG
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| Protein sequence | MPFSHNPKLM FQSDFDGTLT EGDVSFLILE KYAQGDWCAI LREYQQGKIS VGDFNYRAFA
LVKEDRETLV EFIRKNAVPK KGIYELINYC RQENIRFSVV SNGLDFYIHT MLEELGFKDI
EINAARTLFT SNGLDARYYG PDGKMVENGF KESYTNHFIS QNYQVIYAGN GPSDFPPAKL
CEYTFATDML LDRFKQSNLP CYPFQDLHDV VSRLKTIPR
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