Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0678 |
Symbol | rplT |
ID | 5131904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 669721 |
End bp | 670080 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529587 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_001214140 |
Protein GI | 147669322 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000222591 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCACGTA TTAAAGGTGG CTTAGCCACA CATAAAAGAC ATAAGAAGGT CCTGGCCTTA ACAAAGGGCC ACGCTTCAAC CAGACATTCG CTGTTCAAGC GGGCACATGA GTCCATGGTT CATGCCATGA GCTATGCTTT TGCCCACAGA CGAGCACGCA AAGGTGATAT GCGCAGGCTT TGGATTACCC GTATCAATGC GGCTGCCAGG GCTGAAGGGC TTACTTATGG TGAGCTTATA TCAGGGCTTA AGGTTGCCGG TATTGATATA AACCGTAAAG TTTTAGCCGA TATGGCCATA TCAGACACTG TTGCTTTTGC CGCTGTGGCT GCCAAAGCCG CTGCTGCTAA AGCTAACTAA
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Protein sequence | MARIKGGLAT HKRHKKVLAL TKGHASTRHS LFKRAHESMV HAMSYAFAHR RARKGDMRRL WITRINAAAR AEGLTYGELI SGLKVAGIDI NRKVLADMAI SDTVAFAAVA AKAAAAKAN
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