| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0671 |
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| Symbol | |
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| ID | 5132355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 660770 |
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| End bp | 661756 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640529579 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001214133 |
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| Protein GI | 147669315 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.1397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA TTGATAGCAC CACCGGTGCA AACGCCTCAA ATTTGCCCCT GTCGCCTTTA
CTGGTCATTC TGGGCAACAC CGGCTCAGGT AAAAGCGCTC TGGCTATAAA TTTAGCAAAA
GTTATCCCTG CCGGCATAAT AAATGCTGAT AGCCGCCAGA TATACTCCCG GATGGATATT
GCCACCGCCA AACCCACTCT GTCAGAAATG TTAGAAATAC CTCACTATCT TTACAGTTTT
ATTCAACCTG ACCAGCCTTT CAGTCTGGCA GAATATCAGA CACTTGCTTA TCAGGCTATA
GATAGTCTCC ATACCCAAAA CCGTTTACCT GTATTGGTAG GTGGGAGCGG GCAATACCTG
AAAGCCGTGC TTGAGGGTTG GAGTATTCCC CCGGTAGCCC CTGATGAAAC CTTTCGTGCC
GCTCTATTCG AAAAAGCGGA AAAAGAAGGG GGAGATGTCA TTTTTACAGA ACTAGAAAAA
AAGGACCCGC AGGCTGCTAC CCAGATAGAC CCCCGCAATA TCCGCCGGGT TGTACGGGCA
CTGGAGGTTA TCCACAAAAC CGGAGGAAAA TTTTCTGGAC TCCTTATCAA AAATCCACCG
CCGTACAGGG TATTTAAGAT AGGTATACAT ATACCCCGTG AAGAACTTTA CCGCACCGTT
GACTTGCGGG TAGAAAAAAT GTTAGAACAA GGTCTGGAGG CGGAAGTTCG CTCTCTGCTG
GAAAAAGGCT ATAAAGCCAG TTTGCCATCT ATGTCAGGCA TAGGCTACCG CCAGATAGCC
AAATACATTG AGGGCGGTAT CAGCCTGACG GAGGCAGTGG AACAGATGAA GTTTGAAACC
CACCGCCTTA TCCGCCAGCA AAATACCTAT TTCCGTCTGA CAGATACTAA TATACACTGG
ATAACACTTG AAGAAAGCAG GAGTAACGGA ATTATCCAAC TAGTCTGTGA TTTCCTGGCT
GCGGAGAATA AAAATGAAAT TCACTAA
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| Protein sequence | MSIIDSTTGA NASNLPLSPL LVILGNTGSG KSALAINLAK VIPAGIINAD SRQIYSRMDI
ATAKPTLSEM LEIPHYLYSF IQPDQPFSLA EYQTLAYQAI DSLHTQNRLP VLVGGSGQYL
KAVLEGWSIP PVAPDETFRA ALFEKAEKEG GDVIFTELEK KDPQAATQID PRNIRRVVRA
LEVIHKTGGK FSGLLIKNPP PYRVFKIGIH IPREELYRTV DLRVEKMLEQ GLEAEVRSLL
EKGYKASLPS MSGIGYRQIA KYIEGGISLT EAVEQMKFET HRLIRQQNTY FRLTDTNIHW
ITLEESRSNG IIQLVCDFLA AENKNEIH
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