Gene DehaBAV1_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0671 
Symbol 
ID5132355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp660770 
End bp661756 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content46% 
IMG OID640529579 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001214133 
Protein GI147669315 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.1397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAA TTGATAGCAC CACCGGTGCA AACGCCTCAA ATTTGCCCCT GTCGCCTTTA 
CTGGTCATTC TGGGCAACAC CGGCTCAGGT AAAAGCGCTC TGGCTATAAA TTTAGCAAAA
GTTATCCCTG CCGGCATAAT AAATGCTGAT AGCCGCCAGA TATACTCCCG GATGGATATT
GCCACCGCCA AACCCACTCT GTCAGAAATG TTAGAAATAC CTCACTATCT TTACAGTTTT
ATTCAACCTG ACCAGCCTTT CAGTCTGGCA GAATATCAGA CACTTGCTTA TCAGGCTATA
GATAGTCTCC ATACCCAAAA CCGTTTACCT GTATTGGTAG GTGGGAGCGG GCAATACCTG
AAAGCCGTGC TTGAGGGTTG GAGTATTCCC CCGGTAGCCC CTGATGAAAC CTTTCGTGCC
GCTCTATTCG AAAAAGCGGA AAAAGAAGGG GGAGATGTCA TTTTTACAGA ACTAGAAAAA
AAGGACCCGC AGGCTGCTAC CCAGATAGAC CCCCGCAATA TCCGCCGGGT TGTACGGGCA
CTGGAGGTTA TCCACAAAAC CGGAGGAAAA TTTTCTGGAC TCCTTATCAA AAATCCACCG
CCGTACAGGG TATTTAAGAT AGGTATACAT ATACCCCGTG AAGAACTTTA CCGCACCGTT
GACTTGCGGG TAGAAAAAAT GTTAGAACAA GGTCTGGAGG CGGAAGTTCG CTCTCTGCTG
GAAAAAGGCT ATAAAGCCAG TTTGCCATCT ATGTCAGGCA TAGGCTACCG CCAGATAGCC
AAATACATTG AGGGCGGTAT CAGCCTGACG GAGGCAGTGG AACAGATGAA GTTTGAAACC
CACCGCCTTA TCCGCCAGCA AAATACCTAT TTCCGTCTGA CAGATACTAA TATACACTGG
ATAACACTTG AAGAAAGCAG GAGTAACGGA ATTATCCAAC TAGTCTGTGA TTTCCTGGCT
GCGGAGAATA AAAATGAAAT TCACTAA
 
Protein sequence
MSIIDSTTGA NASNLPLSPL LVILGNTGSG KSALAINLAK VIPAGIINAD SRQIYSRMDI 
ATAKPTLSEM LEIPHYLYSF IQPDQPFSLA EYQTLAYQAI DSLHTQNRLP VLVGGSGQYL
KAVLEGWSIP PVAPDETFRA ALFEKAEKEG GDVIFTELEK KDPQAATQID PRNIRRVVRA
LEVIHKTGGK FSGLLIKNPP PYRVFKIGIH IPREELYRTV DLRVEKMLEQ GLEAEVRSLL
EKGYKASLPS MSGIGYRQIA KYIEGGISLT EAVEQMKFET HRLIRQQNTY FRLTDTNIHW
ITLEESRSNG IIQLVCDFLA AENKNEIH