Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0667 |
Symbol | |
ID | 5131322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 656721 |
End bp | 657932 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640529575 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_001214129 |
Protein GI | 147669311 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000065557 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGATA CCATCAATAA AACAGTTGGA AATAATGTAG TAATACAGCC GGAAAGAGCT GTTTTGGCAG CGGTGGATAC CAACCGTAAT TCAAACTGGG CTATAGAAGA CTCACTGGAC GAATTATGCC AGCTGGTGGC TACCGCCGGT GCAACTGTAG TAGGGCGTAT AATCCAGAAG CTTCATGCAC CTGCCCGAAA CTCATACTTG GGAAAAGGCA AGCTGGACGA ACTGATAGAG ATGAAAAAGG AACTTGACTA CAATCTGGTC ATTTTTGATG ATGAACTTTC GCCTATTCAA CAAAGATCAC TTGAGGAAGC ATTGGGTGTA AAGGTAATTG ATCGGGTGGC CCTTATTTTG GATATATTTG CCAAACATGC CAATACCCGT GAGGGCCAGC TTCAGGTAGA GCTTGCACAA ATGCAGTATT TACTGCCAAG GTTGGCAGGC CAATGGAGTC ATCTTGAAAG ACTTGGCGGC GGTATAGGTA CCAGAGGACC GGGTGAATCC CAGCTTGAAA CTGATAAGCG TATTGTTCGT ACCAAGATAC GTAATCTGAA AGAACACCTG GATGAAGTAA CCATTCAACG GGAACTGTAC CGTGAGAGAA GGCGCATGCG TGGCGTACCG GTGGTTTCAT TGGTTGGCTA TACCAATAGC GGTAAAAGTA GCCTGCTGAA TGCCGTTGCC AGAACAGATG TACTGGCTGA AAACAAACTT TTTGCTACTC TTGATCCAAC TACCAGAAGG TTGTATATAA ACGGATTAGG CAATGTATTG TTGACAGATA CAGTGGGCTT CATTCGCAAG TTGCCTCCCG CCATTGTAAA GGCTTTTCGG GCTACGCTGG AAGAAATAAA CCAAGCTGAT TTGCTGGTAC ATGTAGTTGA CATAACTGCT AAGAATGCTT TTGAACAGTG TCAAACAGTG GAAAAAATAC TTACAGACAT GGGTGTAGCT GATAAACCGC GCTTGACTGC TATGAATAAA ATAGACCTGA AATTGGATAC TAACCGCAAC TGGACTGAAG AAGAGGCCTT GAATTTATTA AAAACAGAAT GTCCGGTGGC GGAAAATACA GTGCTTATTT CTGCTGTGAA GCGTTGGGGG TTGATCGAAT TGAACCTCAT GCTCAAAGAA AAGTTGATTA GTATGGGTTT TAACCCCGGG TATGCGGTTT ATGATGAAAT TGGGGAAAAG AAAGAGCAGT AA
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Protein sequence | MEDTINKTVG NNVVIQPERA VLAAVDTNRN SNWAIEDSLD ELCQLVATAG ATVVGRIIQK LHAPARNSYL GKGKLDELIE MKKELDYNLV IFDDELSPIQ QRSLEEALGV KVIDRVALIL DIFAKHANTR EGQLQVELAQ MQYLLPRLAG QWSHLERLGG GIGTRGPGES QLETDKRIVR TKIRNLKEHL DEVTIQRELY RERRRMRGVP VVSLVGYTNS GKSSLLNAVA RTDVLAENKL FATLDPTTRR LYINGLGNVL LTDTVGFIRK LPPAIVKAFR ATLEEINQAD LLVHVVDITA KNAFEQCQTV EKILTDMGVA DKPRLTAMNK IDLKLDTNRN WTEEEALNLL KTECPVAENT VLISAVKRWG LIELNLMLKE KLISMGFNPG YAVYDEIGEK KEQ
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