| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0653 |
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| Symbol | |
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| ID | 5131076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 643074 |
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| End bp | 644195 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529556 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_001214116 |
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| Protein GI | 147669298 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.412317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACC AAGATAACAA CTACGCCATA GGTTTCAGTT ATATAAACGG GGTCGGCCGG
GTACGCCTGA ACCTGCTGGA TAACTATTTC GGCAATCTGG AAAATGCCTG GCATGCCGGC
AAAGAAGCTC TGATATCAGC CGGACTTGAT AACACTCTGG CCGAAAATAT TGTGGCTCAC
CGTCCTAAAA TAGACCTCTC TAAAACCCTT GAAACCCTGA AACGGCATGA TATACAGACA
TATGCCCACA CGGATAAAGA TTATCCTGCC AGCTTAAGGC AAATACATGA TTATCCGCCC
CTTATTTTTG TAAAAGGACA GCTTTTACCA GCAGACGAAC TGTGTTTGGG TATAGTAGGT
ACCCGCCAGC CCACGGTATA CGGAAAACTG GTAACCGAAG AACTGGCGGA GTCTCTGGCA
CGGGCCGGTC TGACCATAGT CTCAGGTCTG GCTAGAGGCA TAGATACTGT TGCCCATACC
GCAGCCCTGA AGGCCGGCGG CAGAAGCATT GCGGTTTTTG GTTGCGGGCT GGATATTATT
TACCCCTCAG AAAACCATTC ACTTGCCCGC CAGATAGCTG AAGACGGGGC GCTTATAAGC
GAACATCCGC CCGGAATCCG TCCCCGCCCC GAATTTTTCC CCCGCCGCAA CCGTATACTC
TCGGGTTTAT GCCGCGGCAT ACTGGTAACC GAAGCTGGAG AAAACAGCGG GGCAGTTATA
ACCGCAAATT ACGCACTTGA ACAAAACCGC GAGATTTTTG CCGTTCCGGG GAGTATACTA
TCACCGTCTT CATTGGGGAC TAACCGCCTT ATTCAGGAAG GGGCAAAGCT GGTTAGCTCT
GCCAAAGACG TACTTGAAGA ACTGAATATC AGCCTGTTTT CAGAGGAGAA TACTACCGTT
GAAATTATAC CTGAAAACCA GACTGAAAGC TTGATATTGG GTAAACTTGG CTATGAGCCT
GTACATATTG ACCAGATTTG CCGTGAGTGC GCTCTGGGTG TAGCCTTGGT CAGTGGCACC
CTGGCCATAA TGGAACTGAA AGGTCAGGTC CGTTCTACCG GAGGCATGAA TTATGTGCGA
ACCCGGGAAA AGAAGGAAAT CTACCAGCTG GAGATGAATT AA
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| Protein sequence | MQNQDNNYAI GFSYINGVGR VRLNLLDNYF GNLENAWHAG KEALISAGLD NTLAENIVAH
RPKIDLSKTL ETLKRHDIQT YAHTDKDYPA SLRQIHDYPP LIFVKGQLLP ADELCLGIVG
TRQPTVYGKL VTEELAESLA RAGLTIVSGL ARGIDTVAHT AALKAGGRSI AVFGCGLDII
YPSENHSLAR QIAEDGALIS EHPPGIRPRP EFFPRRNRIL SGLCRGILVT EAGENSGAVI
TANYALEQNR EIFAVPGSIL SPSSLGTNRL IQEGAKLVSS AKDVLEELNI SLFSEENTTV
EIIPENQTES LILGKLGYEP VHIDQICREC ALGVALVSGT LAIMELKGQV RSTGGMNYVR
TREKKEIYQL EMN
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