Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0620 |
Symbol | |
ID | 5131762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 608537 |
End bp | 609550 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640529523 |
Product | periplasmic binding protein |
Protein accession | YP_001214083 |
Protein GI | 147669265 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000216594 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGATG ATATAAATAT GAAACTTAAC AGTAAGAGTG CCCGGCTGGG TACTACTGTT GCCGGTGTCT TCTTAAGCTT GGTTTTGTTG TTAGGTCTGG TGGGTGGCTG TAAAACTGCA GACGATACCA ATCCTGATGA CGAAAACCCG GTTGTAACTG AAGTGACTTA TCCCCTGACG GTGACAGATC AACTTGGCAG AATCGTAACT ATCCTGTCTG AACCTCAGAC CATAGTTTCT CTTTCTCCCA GCAATACCGA AACTATTTAT GCTATGGGTC TTGAAGATAA ACTGGTGGGT GTGACTACCT ATTGCAATTA CCCCGAAGCC GCCAAAGATA AACCCAAAGT GGGCGGTTTT TCAAATGTGG ATGCCGAAGC GGTGACTGCC ATTGGACCTG ATATTATTCT GGCCTCCAAT ATTCATGCAT CAACAGTTAT TCCTCAGCTT GAACAGCTGG GTCTCACCGT AATAGCTATC AGCCCGGATA ATCTGGAAGA TGTGTTGGCA TCTATTGAGC TTATCGGAAA GTGTCTGAAT CAGGTTAAAA AAGCCAATTC ACTGATGGAC AGTATGCAGA CCCGTATAGA TGCAGTAACA TCCAAGGTTA AAAATCTGTC TGAAAGTCAG AAACCGCGTG TTTTATACAT TGTTTGGCAT GAACCTCTTA TGAGCGTTGG TTCTACTGCC TTCATAACAG GCTTGATTAC TGCTGTCGGA GGCGTTAGTA TTACTGCTGA TTCAGCCGAA TCCTATCCGA CTATTGGTTT GGAGACAGTG CTGGGGGCTA ACCCCCAAGT GGTAGTGGTT GGTACCGGCA TGGGTTCCGG GGCTGATGCG CCGTTGCTGT TTATACAGGA TGAACCCCGT CTGGCTAATA TTGATGCCAG AATCAACGGC AATATATATA GTATAAACAC AGACCTTATC GGCCGTACCG GGCCCCGAAT TGTAGAGGCT CTCGAACAAC TGGCCAAGAT GCTTCACCCT GAAATATTTG GAGCTATCAG CTAA
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Protein sequence | MLDDINMKLN SKSARLGTTV AGVFLSLVLL LGLVGGCKTA DDTNPDDENP VVTEVTYPLT VTDQLGRIVT ILSEPQTIVS LSPSNTETIY AMGLEDKLVG VTTYCNYPEA AKDKPKVGGF SNVDAEAVTA IGPDIILASN IHASTVIPQL EQLGLTVIAI SPDNLEDVLA SIELIGKCLN QVKKANSLMD SMQTRIDAVT SKVKNLSESQ KPRVLYIVWH EPLMSVGSTA FITGLITAVG GVSITADSAE SYPTIGLETV LGANPQVVVV GTGMGSGADA PLLFIQDEPR LANIDARING NIYSINTDLI GRTGPRIVEA LEQLAKMLHP EIFGAIS
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