| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0616 |
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| Symbol | |
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| ID | 5131116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 603631 |
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| End bp | 605631 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640529519 |
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| Product | transketolase |
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| Protein accession | YP_001214079 |
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| Protein GI | 147669261 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATA CGAAATTAGA TAGTTTATGC ATAAACGCCC TTCGCTTTCT TTCGGTAGAC
GCTGTTCAGA AGGCAAATTC GGGGCATCCC GGAGCGCCTA TGGGTATGGC CGCTATGGCA
TATGCCCTGT GGCAAAATTT TCTCAAGCAT AACCCGCAGG ACCCCGCTTG GCCTAACCGT
GACCGTTTTA TACTTTCAGC CGGCCATGCC TCTGCCCTGC TTTATTCACT ACTCCACCTG
ACCGGTTATG ACCTGCCGCT GGACGAACTT AAAAATTTCC GCCAGTGGGG CAGTAAAACA
CCGGGACATC CGGAATACGG CCTGACTCCC GGGGTTGAAA TGACTACCGG CCCGCTTGGG
CAGGGTTTTG CAAGCGGTGT GGGTATGGCT ATGGCCGAAG CTCATTTGGC AGCGGTTTTT
AACCAGCCGG ATTGCAAAAT TATAGACCAT TATACCTACG GCATAGTCTC TGACGGAGAC
CTGATGGAAG GCGTAGCTTC AGAAGCGGCC TCTCTGGCCG GGCATTTAGC CCTTGGCAAG
CTGATTTATC TGTATGATGA CAATGATATA TCTATTGAAG GTTCAACCGA GCTGGCTTTT
ACCGAAAACG CAGCTCTGCG CTTTGAAAGT TACGGCTGGC AGGTTATAGA CCATGTAGAC
GGGCTTGACC CGGAGGCGGT ATCTCAGGCT ATTAAACAAG CCCAGTCAGA TACCACCCGC
CCCAGCCTGA TTATCTGCAA AACAATCATC GGCTTTGGTA GCCCGAATAA GGCCGGCAAG
GCCTCTGCCC ATGGCGAGCC GCTGGGAACA GATGAGGTAT CCAAGAGCCG TAAATCTCTG
GGGTGGGACT ATGAACCGTT TGTAATACCA GTTGAGGCTC TAACAGAGTT CCGCGAAGCA
CTGGGCAAGG GCAAAACAGC CCAGCAGGTT TGGTTGTCCA AGCTGGACTA CTATTTAAGC
CATTATCCCG AAAAAGCCTC CCTGCTGCAG GACATGCTTT CGGGCAACTT ACCTGAAGAC
TGGGACAAAG ATCTGGATAG ACTCTTTGAC AAAGCTATGG CCAGCCGCGA GGCTTCAGGC
CTGCTGATAA ATGCCTTGGC TTCCCGCCTG CCTTCTCTCA TGGGTGGTTC GGCAGACCTC
AGCCCGTCTA ACAAGACCGT TATCAAAGAC GGCGGGGAAT ACGAACCTCA CTATTACGAG
GGACGGAATA TCCATTTCGG AGTGAGGGAG CACGCCATGG GGGCAATAGC TAACGGACTG
GCTCTCCACG GGGGCATAAT ACCTTACGTT GCCACTTTCC TCATATTTTA TGACTACATG
CGTCCGGCTG TACGGTTGGC TTCACTTATG GGGCAAAGAG TGATTTATAT TTTTACCCAT
GATTCCATCG GTCTGGGAGA AGACGGCCCT ACCCACCAAC CCATTGAACA GCTGGCCGGT
CTGCGTTCGG TACCCGGTCT GGTTACTATC CGTCCGGCAG ATTCATATGA GACTGCTCAG
GCATGGAAAA CGGCTATACT CCGTAAGAAC GGCCCTACCG CCATTGCCCT GTCCCGTCAG
AAACTGCCGC TTTTAGATAA CTCTCAGACA AAATCCTTAA ACCTGCCTAA AGGGGCATAT
ATACTGCAGG AAACAGACTC CCACCCGCAG GTAGCTCTAG TTGCCAGCGG GTCTGAAGTA
ACTATAGCGG TTGAAGCGGC TGAAATACTT AAGGGGAAAG GCATATCCTC AAGGGTAGTA
TCTTTCCCTT CATGGCAGCT TTTTGATAAC CAACCCCAAA CCTACCGCCA GAGTGTCCTG
CCTTCTTCCC TGCCACGGGT AATAATGGAA GCTGGCAACT CACAGGGCTG GTGCAAATAT
CTGGGTACAA ACGGAACTGT TATTTCAATT GACCACTTCG GGGCATCAGC CCCGGCGCCC
CTGCTTTACA AAAAATTCGG CCTGACCCCT GAAAACATGG CTGAAAAAGC TTTAAAGCTT
TTGGAGAATG AACATGAGTA A
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| Protein sequence | MSNTKLDSLC INALRFLSVD AVQKANSGHP GAPMGMAAMA YALWQNFLKH NPQDPAWPNR
DRFILSAGHA SALLYSLLHL TGYDLPLDEL KNFRQWGSKT PGHPEYGLTP GVEMTTGPLG
QGFASGVGMA MAEAHLAAVF NQPDCKIIDH YTYGIVSDGD LMEGVASEAA SLAGHLALGK
LIYLYDDNDI SIEGSTELAF TENAALRFES YGWQVIDHVD GLDPEAVSQA IKQAQSDTTR
PSLIICKTII GFGSPNKAGK ASAHGEPLGT DEVSKSRKSL GWDYEPFVIP VEALTEFREA
LGKGKTAQQV WLSKLDYYLS HYPEKASLLQ DMLSGNLPED WDKDLDRLFD KAMASREASG
LLINALASRL PSLMGGSADL SPSNKTVIKD GGEYEPHYYE GRNIHFGVRE HAMGAIANGL
ALHGGIIPYV ATFLIFYDYM RPAVRLASLM GQRVIYIFTH DSIGLGEDGP THQPIEQLAG
LRSVPGLVTI RPADSYETAQ AWKTAILRKN GPTAIALSRQ KLPLLDNSQT KSLNLPKGAY
ILQETDSHPQ VALVASGSEV TIAVEAAEIL KGKGISSRVV SFPSWQLFDN QPQTYRQSVL
PSSLPRVIME AGNSQGWCKY LGTNGTVISI DHFGASAPAP LLYKKFGLTP ENMAEKALKL
LENEHE
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