| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0606 |
|---|
| Symbol | |
|---|
| ID | 5131968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 595922 |
|---|
| End bp | 596767 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640529509 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001214069 |
|---|
| Protein GI | 147669251 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAG CTTTGGGTTA TGGCTTTATC CAGAATGCTA TTTGGGCAGG GCTGCTGGCG
GCAATAGGCT GCGGTATTAT TGGCAGCTAC GTCGTGGTAA AAAAACTGGC ATCCATCAGC
GGCGGTATTG CCCACGCTTC CTTTGGCGGA ATCGGTCTGG GGTATCTGCT GGGCATTAAT
CCGGTGCTGG GTGCGCTGGC ATTCAGTTTG CTGGCTGCTG CCAGCATGGG TACTCTTACT
CGCCGAAGCC GCATAAGTGA AGATACTATT ATCGGTATGC TTTGGGCTTT TGGTATGGCT
CTGGGTATTA TCTTTATTGG TTTAACTCCC GGTTATGCAC CGGATTTATT CAGTTATCTT
TTCGGCAATA TCCTGACAGT GCCGTCTTCA GATCTGGTGC TTATGCTGGT GCTGGATGCA
CTGATAATAG GGGTGGTCTG GTTTTTCTAT AAGGAATTTT TGGGGGTATC TTTTGACGAG
GAATTTTGCC GGGTAAGCGG TATGCCCACC GGGCTGTTAT ATGTAATAAT GCTGGGGCTT
ATAGCGCTGA CAGTGGTAAT GCTGATACGA GTAGTAGGTA TAATACTGGT AATAGCTTTA
CTGACCATAC CGGCAGCAGT AGCCCGCCGT TTTACGGATA GCCTTTTAAA GATGATGGGG
CTTTCAATAG GATTTGGGGT GGTTTTCTGT TTGGGCGGGC TGTGGCTTTC CTATATACTG
GATTTCGCTT CCGGGGCTAC TATTATACTC TTTAGCGTGG CGGTATTTCT GGCGGTTTTA
GCTTTCAAGG GCAAAAAGAA GCAAGAGCCG GCTTCAGATA AAACCGGCTG CATCAACCAC
GAATAA
|
|---|
| Protein sequence | MIEALGYGFI QNAIWAGLLA AIGCGIIGSY VVVKKLASIS GGIAHASFGG IGLGYLLGIN
PVLGALAFSL LAAASMGTLT RRSRISEDTI IGMLWAFGMA LGIIFIGLTP GYAPDLFSYL
FGNILTVPSS DLVLMLVLDA LIIGVVWFFY KEFLGVSFDE EFCRVSGMPT GLLYVIMLGL
IALTVVMLIR VVGIILVIAL LTIPAAVARR FTDSLLKMMG LSIGFGVVFC LGGLWLSYIL
DFASGATIIL FSVAVFLAVL AFKGKKKQEP ASDKTGCINH E
|
|---|
| |