Gene DehaBAV1_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0598 
Symbol 
ID5131901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp586865 
End bp589423 
Gene Length2559 bp 
Protein Length852 aa 
Translation table11 
GC content43% 
IMG OID640529501 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001214061 
Protein GI147669243 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGACC AATACAGATC CTGCCACACC TCTGCAAGGC AAAATGTTTT GCCCGAAAGT 
GCAGACCTGA CAGAGATACT TTCCATGATA GAAAGTACCC GCAATCTTGT ATTGATATTT
AAAACCTCGC CCGAACCCCA GCTGATTTAT GTCAGTTCAA ACTCAGCTTC TATCAGCGGT
TATTCACCTG AGGATTACCT GGCTAACCCT ACCCTGTCAC AAGACATACT AAAACCAATA
GGTTTGGAAC TTAACACCCA CACACTTGAT CGGTTTAGAA TACCTCTAGG TCCGATACCC
TGTTATATCC CCTGCAAAAA GGGGCTGCCG GTTTCAGCAG AAATATTATG TAAACTATCT
TCGGGCAGAC TAATATTCTA TATCCAGTGC CAACATCAGG TCCGGCATAA TGCAAATCAC
CCTGATTTTT CAGATAAAAA CCTGCCCGCA ACTCCTCTGG TAATGGGTTT TCAGCCTGAC
GGCAAACTGA TATTTGCTAA CCACATATTT GAGGAAGTAA CCGGTTATCT TGTGAGCGAA
GTAACCGGTG AAGACTGGAA GTCTTGCGGA TTGTTCAGCC GTGAAACAAC CGACCTTATT
ATTAAAATGT TTCAAGACCG CAAACCCGAT ACCGGACAAC CTTTTGAACT TCAACTAATC
CATAAAAACG GCCAAACCTG CTGGTTTTCC GGCCATAGCC GGATAATCAA CAGGGATAAC
AAATCCTCCT ATCTGCAACT TTCAGCCAGC GATATTACAA TATGCAAAAA ATCCGAAAAA
ATGCTCCGTC TGACCAGATT TGCACTGGAA CAAACTACAG ATGCCATATT CTGGACTGAT
TCTGAGGGTA ATTTCGTAGA TGTAAATCAA TCAGCCTGTA ACTCTCTCGG CTACAGACGA
GAAGACCTGC TAAAACTAAA AGTCACGGAT ATAGACGCCC TGATAACTAA TCAGACTGAT
TGGGAAGCGC ACTGGAAAAA TCTGAAAAAC AGCGCCTACC TTAGTTTTGA ATCTATCCAC
CGGAACATAA GCGGCGAAGA AATACCGGTG GAAATAACCG CCAACTATAT GCAGTGCGAT
AAAATGGAAT ACAACGTAGC CATAGCCCGA AATATCCACC TGCGCAAAGA AGCCGAAAAA
CAGCTGAAGT TCACCTCATT TTCAGTTGAG CATACGGCAG ATTCCGTTCT TTGGGTTAAT
CAAAGCGGCA GTATAATAGC CGCCAATATG TCTGCCTGCC AATCACTGGG CTACACTCGG
ACAGAACTGT GCAGTTTAAA CGTAATAAAT ATAAATCCTG TATGCGTTGC GGAAAGATGG
AAAACCCTCT GGGTCAGACT AAAACAGGAT ATCAATTTCT CATTAGAATC TGACATGTTT
ACAAAAAACG GGCAGCAAAT ACCTATTGAA GTAATGTGCA ATTTCCTTGA GTTTGAGGGG
ATTGACTATT GCTGCGCCGT ATTACGGGAT ATAACTGAGC GCAAGAAAGT GGACGCACGG
TTATTAAGGG CGGCAGAGGA ATGGAGAATA ACATTTGATA ATATATCCGA TATAGTATTT
CTGCTGGATA ATGACTTTAA TATCCAGCGG GCTAATCGGG CATTTACAAA AACCCTGAAC
TGCCAGCCCC AAGACGTTTT AAACAAGAAA TGCTACCAGG TACTGCACCA TGCCGATTGC
CCAAAAGTAA ATTGCCCGAA ACTTATAGCT TCTGATACAA AAAAGTCCCA GCGTATCGCG
TATTTTGAGA AAAATATAGA TAAGCATTTT GAAGAAACAA TTGACCCCAT TCTGGACACG
AACGGGCTAT CTATGGGAAC TGTGCACACC ATAAAGGATG TTACCGAACA ACATAAGATA
ACCGCCCAAC TGATGATAAC TGACCGGCTG GCTTCACTGG GCGAATTGTC CGCCGGACTG
GCTCATGAAC TTAATAACCC TCTGACCAGT GTGATAGGTT TTTCAGAGCT TATTCAGGAG
AAAATTCTGC CCGAAGACCT GAGACAGGAT ATCCAGATAA TCAGCCAGGA AGCTCAGCGG
GCGGCTGAAA TAATCCGTAA CCTTCTCACC TTTGCCCGCC GCCATGAACC ATCCAAAGAC
TGGGTGGACA TGAACCAGAT AATACATAAG GTGCTTGCTA TCTGCAACTA CGGGCAGAAA
GTCCATAACA TTCAGCTAAT TACCAATCTG GATCCAAATT TGCCGGAGAT AAAAGCAGAC
TACTTCCAGA TGCAGCAGGT GCTTTTAAAT ATAGTCATAA ATGCTGAATA TTTTATGACC
CAGTCACATG GTGAAGGTAC CATAGTAATC TCAAGCCGCA AATTTAACGA CAGTATCCAG
ATTTCTATTC GGGATGATGG TCCGGGTATG TCAGAAAATG TCTTAAATCA TATATTTGAT
CCGTTTTTTA CCACTAAAGA AGTAGGCAAA GGTACGGGGT TAGGACTATC TATCGGACAT
GGTATAATCA CCCAGCACGG TGGTAAACTA TACGCAGAAA GTTCCGAAGG TAAGGGCGCT
ACCTTTTTTA TAGAGATTCC AATCAACCAG CCAGATTAA
 
Protein sequence
MQDQYRSCHT SARQNVLPES ADLTEILSMI ESTRNLVLIF KTSPEPQLIY VSSNSASISG 
YSPEDYLANP TLSQDILKPI GLELNTHTLD RFRIPLGPIP CYIPCKKGLP VSAEILCKLS
SGRLIFYIQC QHQVRHNANH PDFSDKNLPA TPLVMGFQPD GKLIFANHIF EEVTGYLVSE
VTGEDWKSCG LFSRETTDLI IKMFQDRKPD TGQPFELQLI HKNGQTCWFS GHSRIINRDN
KSSYLQLSAS DITICKKSEK MLRLTRFALE QTTDAIFWTD SEGNFVDVNQ SACNSLGYRR
EDLLKLKVTD IDALITNQTD WEAHWKNLKN SAYLSFESIH RNISGEEIPV EITANYMQCD
KMEYNVAIAR NIHLRKEAEK QLKFTSFSVE HTADSVLWVN QSGSIIAANM SACQSLGYTR
TELCSLNVIN INPVCVAERW KTLWVRLKQD INFSLESDMF TKNGQQIPIE VMCNFLEFEG
IDYCCAVLRD ITERKKVDAR LLRAAEEWRI TFDNISDIVF LLDNDFNIQR ANRAFTKTLN
CQPQDVLNKK CYQVLHHADC PKVNCPKLIA SDTKKSQRIA YFEKNIDKHF EETIDPILDT
NGLSMGTVHT IKDVTEQHKI TAQLMITDRL ASLGELSAGL AHELNNPLTS VIGFSELIQE
KILPEDLRQD IQIISQEAQR AAEIIRNLLT FARRHEPSKD WVDMNQIIHK VLAICNYGQK
VHNIQLITNL DPNLPEIKAD YFQMQQVLLN IVINAEYFMT QSHGEGTIVI SSRKFNDSIQ
ISIRDDGPGM SENVLNHIFD PFFTTKEVGK GTGLGLSIGH GIITQHGGKL YAESSEGKGA
TFFIEIPINQ PD