| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0598 |
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| Symbol | |
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| ID | 5131901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 586865 |
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| End bp | 589423 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640529501 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001214061 |
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| Protein GI | 147669243 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACC AATACAGATC CTGCCACACC TCTGCAAGGC AAAATGTTTT GCCCGAAAGT
GCAGACCTGA CAGAGATACT TTCCATGATA GAAAGTACCC GCAATCTTGT ATTGATATTT
AAAACCTCGC CCGAACCCCA GCTGATTTAT GTCAGTTCAA ACTCAGCTTC TATCAGCGGT
TATTCACCTG AGGATTACCT GGCTAACCCT ACCCTGTCAC AAGACATACT AAAACCAATA
GGTTTGGAAC TTAACACCCA CACACTTGAT CGGTTTAGAA TACCTCTAGG TCCGATACCC
TGTTATATCC CCTGCAAAAA GGGGCTGCCG GTTTCAGCAG AAATATTATG TAAACTATCT
TCGGGCAGAC TAATATTCTA TATCCAGTGC CAACATCAGG TCCGGCATAA TGCAAATCAC
CCTGATTTTT CAGATAAAAA CCTGCCCGCA ACTCCTCTGG TAATGGGTTT TCAGCCTGAC
GGCAAACTGA TATTTGCTAA CCACATATTT GAGGAAGTAA CCGGTTATCT TGTGAGCGAA
GTAACCGGTG AAGACTGGAA GTCTTGCGGA TTGTTCAGCC GTGAAACAAC CGACCTTATT
ATTAAAATGT TTCAAGACCG CAAACCCGAT ACCGGACAAC CTTTTGAACT TCAACTAATC
CATAAAAACG GCCAAACCTG CTGGTTTTCC GGCCATAGCC GGATAATCAA CAGGGATAAC
AAATCCTCCT ATCTGCAACT TTCAGCCAGC GATATTACAA TATGCAAAAA ATCCGAAAAA
ATGCTCCGTC TGACCAGATT TGCACTGGAA CAAACTACAG ATGCCATATT CTGGACTGAT
TCTGAGGGTA ATTTCGTAGA TGTAAATCAA TCAGCCTGTA ACTCTCTCGG CTACAGACGA
GAAGACCTGC TAAAACTAAA AGTCACGGAT ATAGACGCCC TGATAACTAA TCAGACTGAT
TGGGAAGCGC ACTGGAAAAA TCTGAAAAAC AGCGCCTACC TTAGTTTTGA ATCTATCCAC
CGGAACATAA GCGGCGAAGA AATACCGGTG GAAATAACCG CCAACTATAT GCAGTGCGAT
AAAATGGAAT ACAACGTAGC CATAGCCCGA AATATCCACC TGCGCAAAGA AGCCGAAAAA
CAGCTGAAGT TCACCTCATT TTCAGTTGAG CATACGGCAG ATTCCGTTCT TTGGGTTAAT
CAAAGCGGCA GTATAATAGC CGCCAATATG TCTGCCTGCC AATCACTGGG CTACACTCGG
ACAGAACTGT GCAGTTTAAA CGTAATAAAT ATAAATCCTG TATGCGTTGC GGAAAGATGG
AAAACCCTCT GGGTCAGACT AAAACAGGAT ATCAATTTCT CATTAGAATC TGACATGTTT
ACAAAAAACG GGCAGCAAAT ACCTATTGAA GTAATGTGCA ATTTCCTTGA GTTTGAGGGG
ATTGACTATT GCTGCGCCGT ATTACGGGAT ATAACTGAGC GCAAGAAAGT GGACGCACGG
TTATTAAGGG CGGCAGAGGA ATGGAGAATA ACATTTGATA ATATATCCGA TATAGTATTT
CTGCTGGATA ATGACTTTAA TATCCAGCGG GCTAATCGGG CATTTACAAA AACCCTGAAC
TGCCAGCCCC AAGACGTTTT AAACAAGAAA TGCTACCAGG TACTGCACCA TGCCGATTGC
CCAAAAGTAA ATTGCCCGAA ACTTATAGCT TCTGATACAA AAAAGTCCCA GCGTATCGCG
TATTTTGAGA AAAATATAGA TAAGCATTTT GAAGAAACAA TTGACCCCAT TCTGGACACG
AACGGGCTAT CTATGGGAAC TGTGCACACC ATAAAGGATG TTACCGAACA ACATAAGATA
ACCGCCCAAC TGATGATAAC TGACCGGCTG GCTTCACTGG GCGAATTGTC CGCCGGACTG
GCTCATGAAC TTAATAACCC TCTGACCAGT GTGATAGGTT TTTCAGAGCT TATTCAGGAG
AAAATTCTGC CCGAAGACCT GAGACAGGAT ATCCAGATAA TCAGCCAGGA AGCTCAGCGG
GCGGCTGAAA TAATCCGTAA CCTTCTCACC TTTGCCCGCC GCCATGAACC ATCCAAAGAC
TGGGTGGACA TGAACCAGAT AATACATAAG GTGCTTGCTA TCTGCAACTA CGGGCAGAAA
GTCCATAACA TTCAGCTAAT TACCAATCTG GATCCAAATT TGCCGGAGAT AAAAGCAGAC
TACTTCCAGA TGCAGCAGGT GCTTTTAAAT ATAGTCATAA ATGCTGAATA TTTTATGACC
CAGTCACATG GTGAAGGTAC CATAGTAATC TCAAGCCGCA AATTTAACGA CAGTATCCAG
ATTTCTATTC GGGATGATGG TCCGGGTATG TCAGAAAATG TCTTAAATCA TATATTTGAT
CCGTTTTTTA CCACTAAAGA AGTAGGCAAA GGTACGGGGT TAGGACTATC TATCGGACAT
GGTATAATCA CCCAGCACGG TGGTAAACTA TACGCAGAAA GTTCCGAAGG TAAGGGCGCT
ACCTTTTTTA TAGAGATTCC AATCAACCAG CCAGATTAA
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| Protein sequence | MQDQYRSCHT SARQNVLPES ADLTEILSMI ESTRNLVLIF KTSPEPQLIY VSSNSASISG
YSPEDYLANP TLSQDILKPI GLELNTHTLD RFRIPLGPIP CYIPCKKGLP VSAEILCKLS
SGRLIFYIQC QHQVRHNANH PDFSDKNLPA TPLVMGFQPD GKLIFANHIF EEVTGYLVSE
VTGEDWKSCG LFSRETTDLI IKMFQDRKPD TGQPFELQLI HKNGQTCWFS GHSRIINRDN
KSSYLQLSAS DITICKKSEK MLRLTRFALE QTTDAIFWTD SEGNFVDVNQ SACNSLGYRR
EDLLKLKVTD IDALITNQTD WEAHWKNLKN SAYLSFESIH RNISGEEIPV EITANYMQCD
KMEYNVAIAR NIHLRKEAEK QLKFTSFSVE HTADSVLWVN QSGSIIAANM SACQSLGYTR
TELCSLNVIN INPVCVAERW KTLWVRLKQD INFSLESDMF TKNGQQIPIE VMCNFLEFEG
IDYCCAVLRD ITERKKVDAR LLRAAEEWRI TFDNISDIVF LLDNDFNIQR ANRAFTKTLN
CQPQDVLNKK CYQVLHHADC PKVNCPKLIA SDTKKSQRIA YFEKNIDKHF EETIDPILDT
NGLSMGTVHT IKDVTEQHKI TAQLMITDRL ASLGELSAGL AHELNNPLTS VIGFSELIQE
KILPEDLRQD IQIISQEAQR AAEIIRNLLT FARRHEPSKD WVDMNQIIHK VLAICNYGQK
VHNIQLITNL DPNLPEIKAD YFQMQQVLLN IVINAEYFMT QSHGEGTIVI SSRKFNDSIQ
ISIRDDGPGM SENVLNHIFD PFFTTKEVGK GTGLGLSIGH GIITQHGGKL YAESSEGKGA
TFFIEIPINQ PD
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