Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0591 |
Symbol | |
ID | 5131819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 580113 |
End bp | 580652 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640529494 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001214054 |
Protein GI | 147669236 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0918415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGTA AATTTATAGC CCTCAGTTTC CTGCTTCTTA GTAGCCTTTG CCTGTCCGCC TGCAGCCAAA CCACGCCAGT TCCGGCTGAC AATGGTGAAC AACCTGTGGC AGGCATTAAA ATAAACAATC TGGCACCTGA TTTTTCCCTG AAAAACCTTA CGGGTCAGGA AATAAGGCTA AGTAACCTGC AAGGTTCAGG GGTAATTTTA AACTTCTGGA AAATAAGCTG CAGTTACTGC AAACAGGAAA TGCCTTTCTT TGAAGCGGCC TACCTAAAAA ACAAGACTCT CCCCAGCGGC ATTAAGATTC TTATGGTAAA TATAACAGAA AATAAATCAC TGATAGAACA GTTTCTGAAG GACAACCGGT TTACCTTTCC GGTACTGCTG GATACCACCG GTGCTACAGG GCAAACCTAT AATGCCAATT ATATTCCCAT TACCTATTTT ATAAATGCCG AAGGCATAAT AAAAGCCATA AAATTCGGGG CATTTTCCAG CCAGACAGAT TTTGATAACC AGCTAAACAA GATAAACTAA
|
Protein sequence | MKSKFIALSF LLLSSLCLSA CSQTTPVPAD NGEQPVAGIK INNLAPDFSL KNLTGQEIRL SNLQGSGVIL NFWKISCSYC KQEMPFFEAA YLKNKTLPSG IKILMVNITE NKSLIEQFLK DNRFTFPVLL DTTGATGQTY NANYIPITYF INAEGIIKAI KFGAFSSQTD FDNQLNKIN
|
| |