Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0581 |
Symbol | |
ID | 5131938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 572422 |
End bp | 572970 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640529484 |
Product | hypothetical protein |
Protein accession | YP_001214044 |
Protein GI | 147669226 |
COG category | [S] Function unknown |
COG ID | [COG1636] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.513342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTA AACTGCTTCT TCATGGCTGT TGTGCACATT GTACCGCTTA CTCTTTCAAA TACTGGCAGG AGCAGGGTTT TGAGGTAAGT GTTTACTGGT ATAACCCCAA TATCCACCCC TTTACAGAAC ACCAAAACAG GCTTGAGGCT ATGGTAAAAT TGTCCCAAGA ACTTAGTTTT GAGCTTGTCA CAGAGCCTCT TTATCAGATG GCTGAATATT TCAAAAAAGT AGCCGAAAAA CCGGATGAAC GCTGCCGTAC CTGCTTTGAT ATGCGGCTGG GGCAAACTGC CGTTTATGCC GCAAGGTATG GGTACGAATA TTTCTCTTCC AGTCTTTTTA TCAGCCCCCA TCAGAAGCAT CAGGAAGCAG TTTTTTCGGC TGAAGCTTTT GCCAAAGAAA CAGGGGTCAA ATTTGCTTAT GCAGACCTCA GGAAACGTTA TTCGGACAGC CGCCATATTA CCAAGCCGTT GGACCTTTAT CGCCAGCAGT ACTGCGGGTG TATATACAGC GAGTATGAAC GGTTCGGTAA AACAGACCCG CCTGCCTGA
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Protein sequence | MAAKLLLHGC CAHCTAYSFK YWQEQGFEVS VYWYNPNIHP FTEHQNRLEA MVKLSQELSF ELVTEPLYQM AEYFKKVAEK PDERCRTCFD MRLGQTAVYA ARYGYEYFSS SLFISPHQKH QEAVFSAEAF AKETGVKFAY ADLRKRYSDS RHITKPLDLY RQQYCGCIYS EYERFGKTDP PA
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