Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0557 |
Symbol | recR |
ID | 5132278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 543102 |
End bp | 543716 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529460 |
Product | recombination protein RecR |
Protein accession | YP_001214020 |
Protein GI | 147669202 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGGACA CTTCTTTACC GTCTACGGCC GGTGTGGTAA ACAAGCTGAT AGATTCACTG GGCAAACTGC CGGGTATAGG CCCGAAAAGC GCCCAGCGTC TGGCATTTTA CCTTATGCGG GCACCTGAAG ATCAGGTTAT TTCCCTCTCA GACACTATCC GCAATATAAA AAACCAGATA AGCCAGTGCC GCATTTGCTG TAACGTGGCT GATAGTGAGC TTTGCCCCAT TTGCCAGAAT ACCAAACGCG AAACAAATAA GATTTGCGTG GTTGAACAGC CTCAGGATAT TCTGGCTCTT GAACATGTAG GTGTCTACCG CGGATACTAC CATGTACTGC ATGGAGCTAT TTCCCCCACC GAAGGGATAA CCTCCCAGAA CATACGTATA AACGAGCTTA TGGTTCGGCT GGATAATGGT CAGGTAGAAG AGATTATTCT GGCTACCAAT CCCACTACCG AAGGTGAAGC CACCGCCATG TACCTTTCGC GGCTGATAAC CCCACTGGGT ATAAAAGTGA CCAGACTGGC ACGGGGCTTA CCCTTCGGGA CAGAACTGGA ATATGCTGAC GATGTAACTT TAAGCCGAGC CATGGAGGGA CGCCAGAACT TTTAG
|
Protein sequence | MKDTSLPSTA GVVNKLIDSL GKLPGIGPKS AQRLAFYLMR APEDQVISLS DTIRNIKNQI SQCRICCNVA DSELCPICQN TKRETNKICV VEQPQDILAL EHVGVYRGYY HVLHGAISPT EGITSQNIRI NELMVRLDNG QVEEIILATN PTTEGEATAM YLSRLITPLG IKVTRLARGL PFGTELEYAD DVTLSRAMEG RQNF
|
| |