| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0547 |
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| Symbol | |
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| ID | 5132130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 533451 |
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| End bp | 535046 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529449 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001214010 |
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| Protein GI | 147669192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AAATACTGCT TATAATCCTT TCGGTCTGTC TCAGTTTCAG TTTGCTTCTA
AGCGGCTGTG GCTATGCACC GGAAGATAAC ACTATGCCCA CAGGTAACAA CGTCCTTACA
CTGGTGGGGC AGGAACCATA TACCCTTGAC CCTGCCAAGG TAAGTGACAG CGGTTCGGTT
ACCTATATTT ATCAGATATT CAGCGGGTTG TTGAAAATGG GTGATGATCT TACTCCTGTT
GCGGATATTG CACAGAGTTG GGAAGTAAGC CCTGACGGGC TTACCTATAC ATTTTATTTA
AAACCAAATG TGAAATTTCA TAACGGCCGT GTCTTGACTG CTGCAGATTT TAAATACTCT
TGGGAGAGGG CAGCCAGCCC GGCCACTGCC TCTAATACGG TGCTGACCTT TCTTGGGGAT
ATTCAGGGCG TAACCGAAAT GGTGCAGGGA CAGGCAAACT CCATTTCGGG TGTGACTGTG
GTAGATGACC TGACTTTAAA AGTAAAACTG GTATCCCCCT GCAGTTTCTT CCTCTCAAAA
ATTTCATATG TAACTGCTTT CGTGGTGGAC AAGGATAATG TATCCCAAGG TAGTGACTGG
TGGAAAAAAC CGGTAGGTAC CGGCCCGTTT ATGCTCCCGG AACTTACCCA GGGGAATTAT
ATTATGCTAA ACAGCAACCC TGACTATTAT GATACCCCGG CCAAGATTTC CAGTGTTATT
TTCCGTCTCC AGTCCGGCCA ACCCATGGAT TTATATGAAG TGGGCGGGAT AGATGTGGCA
GGTGTCAGTG CTGATTATCT GGCCAAAGCC ACTGACCCTG ACGGGTTTTT TTCAGCTGAT
TTGCAGGTGG TGCCTCAACT TAGTTTTTAC TATTTTGCCT ATGTTACCAG TAAAGCCCCC
TTTGACGACC CCAAGATTCG TCAGGCTTTC AGCATGGCGG TAGACAAAGC CCGTATTATA
GAGCTAAGCT ACAAGGGAAG TGTCAGCGTG GCTGAAGGCA TTTTGCCGCC GGGTATGCCC
GGTTACAATC CTGACCTGTC CGGGCTTGAG TATAATCCTG AACGTGCCCG TGAACTTATT
GCGGAGTCTT CCTATGGCAG TGTGGAAAAC CTGCCCACTA TTACCCTGAC AGCCTCAGGC
TGGGGAGGGT TGCTTCCGGT GGAACTGGAA GCGGTGATTG ACCAGTGGAG GCAAAATCTG
GGGGTAGAAG TGGTGGTACG CCAGATAGAT ATGGAACGTT TCCTTTATGA CCTTCAGACT
GAAAAAGACA ACCTCTACTA TTCCGGCTGG GTGGCAGATT ACCCCCACCC GCAGGATTTT
CTGTCAGTGC TTTTTGAGAC CACTTCATCT TACAACAGCG GAGATTACTC TAACCCTGAG
GTAGACGCAC TGCTTGTGCA GGCGGCTGCC ACTCTGGATA CGGAAGAAAG TATGCAGCTT
TATGCTCAGG CAGAACAAAT ACTGATAAAT GATGCTGCTT GCCTGAGCTT TTGGTTTGGC
AAGAATTACA TGTTAGTCAA ACCCTATGTA AAGGGCTACA AGCTGAATGC AATGGGTATC
CCCATACTTA CGGAAGTTAG CCTTGAAGCT CACTAA
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| Protein sequence | MMKKILLIIL SVCLSFSLLL SGCGYAPEDN TMPTGNNVLT LVGQEPYTLD PAKVSDSGSV
TYIYQIFSGL LKMGDDLTPV ADIAQSWEVS PDGLTYTFYL KPNVKFHNGR VLTAADFKYS
WERAASPATA SNTVLTFLGD IQGVTEMVQG QANSISGVTV VDDLTLKVKL VSPCSFFLSK
ISYVTAFVVD KDNVSQGSDW WKKPVGTGPF MLPELTQGNY IMLNSNPDYY DTPAKISSVI
FRLQSGQPMD LYEVGGIDVA GVSADYLAKA TDPDGFFSAD LQVVPQLSFY YFAYVTSKAP
FDDPKIRQAF SMAVDKARII ELSYKGSVSV AEGILPPGMP GYNPDLSGLE YNPERARELI
AESSYGSVEN LPTITLTASG WGGLLPVELE AVIDQWRQNL GVEVVVRQID MERFLYDLQT
EKDNLYYSGW VADYPHPQDF LSVLFETTSS YNSGDYSNPE VDALLVQAAA TLDTEESMQL
YAQAEQILIN DAACLSFWFG KNYMLVKPYV KGYKLNAMGI PILTEVSLEA H
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