Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0543 |
Symbol | |
ID | 5131583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 529687 |
End bp | 530358 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529445 |
Product | endonuclease V |
Protein accession | YP_001214006 |
Protein GI | 147669188 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000265335 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTGA AAATTAAAAA GCTTCATAAT TGGGATATGA CACCCACCGA GGCAATACTT CTTCAGCGTG AACTTGCCCA AAAAGTGTCT GCTTGCGGCA CTCTTTCTAG CATAAGCTTG GTTGCCGGGG CAGATGTCTG GCACAGCCGC ACTTCAGGTA TGGGCAGGGC GGCAGTAGTG GTGCTGAGCT ATCCGGATAT GAATCTGGTG GAGGTGAGCC GCTCCGAAGG GGATTGCCAT ATTCCTTATA TACCCGGTTT ATTGTCATTC AGAGAAATGC CACTTTTACT TTCCGCTTTT GAGGGTCTGG AAAGCATGCC CGACCTTATT CTTATGGACG GGCAGGGGCT GGCTCATCCC AGACGGCTTG GCATTGCTTC GCATCTGGGG CTTTTTTTAA ATAAACCGGT AATCGGTTGT GCCAAGAGCC GTCTGGTCGG CGAGTATACA CCTCTGGCTG ATGAGGCTGG AAGTTACTCA GACTTGTATC ATAACAGCCA GCTGGTAGGA CGGGTGCTGC GTACCCGCAG GGGGGTAAAC CCTTTGTTCA TATCAGTAGG GCACAAAATT TGCCTTGAAG AAGCTTGCAG CCGGGTTGCA GATTGTTGCC GGGGGTACCG TTTGCCTGAA CCCCTCCGCC ATGCTCATTT GGCGGCTGCC GAGCTGATTT AA
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Protein sequence | MNVKIKKLHN WDMTPTEAIL LQRELAQKVS ACGTLSSISL VAGADVWHSR TSGMGRAAVV VLSYPDMNLV EVSRSEGDCH IPYIPGLLSF REMPLLLSAF EGLESMPDLI LMDGQGLAHP RRLGIASHLG LFLNKPVIGC AKSRLVGEYT PLADEAGSYS DLYHNSQLVG RVLRTRRGVN PLFISVGHKI CLEEACSRVA DCCRGYRLPE PLRHAHLAAA ELI
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