Gene DehaBAV1_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0543 
Symbol 
ID5131583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp529687 
End bp530358 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID640529445 
Productendonuclease V 
Protein accessionYP_001214006 
Protein GI147669188 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000265335 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGA AAATTAAAAA GCTTCATAAT TGGGATATGA CACCCACCGA GGCAATACTT 
CTTCAGCGTG AACTTGCCCA AAAAGTGTCT GCTTGCGGCA CTCTTTCTAG CATAAGCTTG
GTTGCCGGGG CAGATGTCTG GCACAGCCGC ACTTCAGGTA TGGGCAGGGC GGCAGTAGTG
GTGCTGAGCT ATCCGGATAT GAATCTGGTG GAGGTGAGCC GCTCCGAAGG GGATTGCCAT
ATTCCTTATA TACCCGGTTT ATTGTCATTC AGAGAAATGC CACTTTTACT TTCCGCTTTT
GAGGGTCTGG AAAGCATGCC CGACCTTATT CTTATGGACG GGCAGGGGCT GGCTCATCCC
AGACGGCTTG GCATTGCTTC GCATCTGGGG CTTTTTTTAA ATAAACCGGT AATCGGTTGT
GCCAAGAGCC GTCTGGTCGG CGAGTATACA CCTCTGGCTG ATGAGGCTGG AAGTTACTCA
GACTTGTATC ATAACAGCCA GCTGGTAGGA CGGGTGCTGC GTACCCGCAG GGGGGTAAAC
CCTTTGTTCA TATCAGTAGG GCACAAAATT TGCCTTGAAG AAGCTTGCAG CCGGGTTGCA
GATTGTTGCC GGGGGTACCG TTTGCCTGAA CCCCTCCGCC ATGCTCATTT GGCGGCTGCC
GAGCTGATTT AA
 
Protein sequence
MNVKIKKLHN WDMTPTEAIL LQRELAQKVS ACGTLSSISL VAGADVWHSR TSGMGRAAVV 
VLSYPDMNLV EVSRSEGDCH IPYIPGLLSF REMPLLLSAF EGLESMPDLI LMDGQGLAHP
RRLGIASHLG LFLNKPVIGC AKSRLVGEYT PLADEAGSYS DLYHNSQLVG RVLRTRRGVN
PLFISVGHKI CLEEACSRVA DCCRGYRLPE PLRHAHLAAA ELI