| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0527 |
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| Symbol | |
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| ID | 5131229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 515564 |
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| End bp | 517330 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529429 |
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| Product | DNA primase |
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| Protein accession | YP_001213990 |
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| Protein GI | 147669172 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00124146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG CAGTAGAAGA AATAAAGCAA AAACTGGATA TTGTCAGCTT TATAGGTCAG
TATACTAAAC TGACCAAAGC CGGCCGCACT ATGCGCGGAA TTTGCCCGTT TCACAGCGAA
AAACACGGCT CTTTTTTCGT TTACCCCGAA GCCCAAAACT GGCACTGCTT CGGCGCATGC
AATACCGGCG GTGACATCTT CGCTTTTGTA ATGAAAAAAG AAGGACTGGA TTTCAAGGCC
GCACTGGAAC TGCTGGCCGA AAAAGCCGGC GTAAGCCTGC CCAGCCAGAT AAACCCGGCA
ATCAAAGACC AAAGAGACCG CCTGTATGAA ATAAATCTGT CCGCCGCCCA GTATTACCAT
AACCTGCTTT TAAACAGCCC TCAGGCGGAA AATGCCCGTA TCTACCTAAA CTCCCGCGGC
CTAAATGAAC AATCCCTGGC AGATTTCCAG CTGGGATACG CCCTGGCGGA CTGGCAGGGG
CTTTATGACT ACCTGAAGGA ACGCAGCTAT TCAGATGAAG ACCTGCTGAA GGCCGGGGTA
ATAGTCCGCT CTGATGAGGG ACGGATTCAT GACCGCTTCC GGAATAATAT TATTTACCCC
ATTGCCAACT ACAAAGGGCA GATAGCCGGT TTCGGGGCAC GAGTTATGGA TAACTCCCAG
CCCAAATACC GTAATTCCCC CCAGACAGAT CTCTTTGACA AAAGCAGCCT GCTGTACGGC
CTGCATCTGG CTTCAGCCAG CATTCGGGAA AATAACCGGG CAATCATAGT GGAAGGCTAT
ATGGATGCCA TCATGTCCCA CCAAGGCGGT TTTACCAATA CGGTAGCCTG CATGGGAACT
GCCCTCACCG AACGCCAAAT AGCTTTAATA AAACGCCAGA CCAAAAACTT AGTATTGGGG
CTGGACTCGG ATTCGGCCGG CGAAGAGGCT ACCTTAAGGG CTATAGATTA TGAAAACCAG
ATGGAGTCTG AAATACGGGT AGCAGTACCC GAAGGAGGCA AAGACCCTGA CGAGCTTATC
CGCCATTCAC CCCAGAGTTG GCAGGAGATA CTGGATAATG CCCGCCCACT GCTGGACTAT
ATATTTGAAC ACAGCCAAAG AGGGCTTGAC CTGAATTCAG CCGCAGGCAA GTCTAAACTG
GCTGACCACC TTTTACCCAT TATATCTAAA ATGGAAGATG GAGTACGCCA GTCCCATTAT
CTTGGCAAAT TGGCCGAAAT AGTAAGCACC AGCCAGAACC GTATACTTGA ACGGCTGAAA
AAACTGAAGA ATGAAACCCG TAATGCCAAA GTTACGGAAA AAGAAGCCCC ATCAGGCCAA
GCCCCCAAAA ACCCCGCCCT TGAGGAGTAT GCCTTAAGCC TGCTTTTCAC ATCAGCGGAG
GTTACCCGTT TCGCCTATAA CCTGCACCCT GAGTATCTTG AGATACCCCA ATACCGGGAA
CTGCTGGCGA TTTATAATCA GTCCGCCGAA AAGGACAATC TGCGGCCTTG CCTTGATGAA
AACCTGCGGG AATATTATGA CAACTTGATG AATAAAAATC CGGCAAATGA TAATATAGAG
GATAAGTTTT ACGACCTATG CCTGAGGCTG AGAGAAAGAT ACCTCCGGAA CTTGGCGGTA
AAACTTAACC AGGCCTTAAG CGAAATCAAC CAGCCGGAAA CAACTGAATA CCAGGCGCTG
AATGACCAGT GTGTAAAGGT CAACGAAGAA CTGCGGAGTG TATTCAGCCT TAAAGACAGA
CGAAACCAGA AACAGAGGAG ACAATAA
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| Protein sequence | MNDAVEEIKQ KLDIVSFIGQ YTKLTKAGRT MRGICPFHSE KHGSFFVYPE AQNWHCFGAC
NTGGDIFAFV MKKEGLDFKA ALELLAEKAG VSLPSQINPA IKDQRDRLYE INLSAAQYYH
NLLLNSPQAE NARIYLNSRG LNEQSLADFQ LGYALADWQG LYDYLKERSY SDEDLLKAGV
IVRSDEGRIH DRFRNNIIYP IANYKGQIAG FGARVMDNSQ PKYRNSPQTD LFDKSSLLYG
LHLASASIRE NNRAIIVEGY MDAIMSHQGG FTNTVACMGT ALTERQIALI KRQTKNLVLG
LDSDSAGEEA TLRAIDYENQ MESEIRVAVP EGGKDPDELI RHSPQSWQEI LDNARPLLDY
IFEHSQRGLD LNSAAGKSKL ADHLLPIISK MEDGVRQSHY LGKLAEIVST SQNRILERLK
KLKNETRNAK VTEKEAPSGQ APKNPALEEY ALSLLFTSAE VTRFAYNLHP EYLEIPQYRE
LLAIYNQSAE KDNLRPCLDE NLREYYDNLM NKNPANDNIE DKFYDLCLRL RERYLRNLAV
KLNQALSEIN QPETTEYQAL NDQCVKVNEE LRSVFSLKDR RNQKQRRQ
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