| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0525 |
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| Symbol | |
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| ID | 5131191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 511251 |
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| End bp | 513830 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640529427 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001213988 |
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| Protein GI | 147669170 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0315541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCTG TCAAACTCAA AATAAAAAAC TTTATGTGTT ACCGGGGCGA AATACCGCCT
TTTTCTTTTA ACGGGATACA TACTGCCTGT ATCTGCGGTC AAAACGGGGC AGGCAAATCC
GCCCTGATAG ATGCCATTAC CTGGGCGCTC TGGGGAAAAA GCCGGGCTAA GAGTGACGAT
GATGTGATTT CCCTAAACGA GCAGGAAGCA GAAGTCAGCC TTGATTTTGA AATTTCAGGT
GAACTTTATC AGGTTATCCG CCAGCGCCAA CGCCCCAAAA AGGCAGGGAC AAATGGACAA
AGCCTGTTAA GCCTTTTTTC ACTCCAAGAT GAAAAACCCC GGAATATAAC CGGAGACACC
CTGACCCAGA CTGAGAAAAA GATAATCTCC ATACTCCATA TGGACTATGA CACCTTTATA
AACAGCGCCT TTCTGAGGCA GGGACATGCC AACCAGTTTA CCCAGCAACC CCCCGGCAAA
CGTAAAGAAG TGCTGGCCAA CATACTGGGG TTAGAAATAT ATGACCAGCT GGAAGATTTG
GCCAGACAGG CTGTACGTGA AGCAGAAACC AAAAACCTGC AGATTGAACA GAGTATTGAA
GATGGCAAAG AAAGTCTGAA GTCCAGACCG GAACTGGAAG AAGCCCTAAA TCATACCCGT
CAAGACCTGG CCGAAGGTGA AGGCAAATTA AAAATTCAGC TTGCCGAGCT GGAAATTATG
CGGCACAAGA AACATAGCTT TGACACCAAA CAAAATACCT GCCGCCAGTT GGATAACGAC
CTGAAGGATA TTTCCAAAGA CCAATCCCGC TGGATTCAAA CCCTGCAAGA AATAAAACAG
CGTATCAGCA CTTTTGAAAC ACTCTCTGCC CAAAAGGAAG CAATCTTTAA AGGTTTTCAG
GAATACTCCG TCTGCCAAAG CCTGTATGAT AAACACAACC GGATATTGGC TAAACTAAGG
CAATTGGAAA ATACCAAAAA GCCCCTTGAA GATGCCGTTT ACAAAGAAGA AAACAATCTT
AAAAATACCT TGGGGAAATA TCAGGAACGC CTGAAATTCA GGCAAGACAC TGCTCAAACT
CTGGTGATAC TGGAAAAAGA AAAAACCCAA TCAGACCAAC TGAAAACCCG GTTGGAAACT
GAAGAGGCGG AACTGAAAAT CCAACAGAAC AAGCTGCTTA ATCTGCAAAG CAGCTTGGCC
AGACTGGAAA CTGAACACGC CGTTGCCGTC AAAGAGGTAA ACGCACTTGA AGAAAAACTG
AACCTGCTGG CTGAAGCGGG TGAAAACCGC TGTAACTGCC CTCTATGCGA AACTGAACTG
GGACAAGACA AGCTCAAGCT GGTGTTTGGC AAATACAAGA CGGAACAGGA TACCCAAAAA
ACCCTGCAAG CAGATCTGCA GGAAAAACTG AGCCAGATGC AATCAGATAT ACAAGCCTTG
CTTAAGTACA TTGAAACCGA AACTAACCGC CTGAGTCATA GCCACAAACA GTATGAAAGA
CAGATAAGTC TACTGGACAA AGGGATTGCG GAGGCTAAAG AGGCTGAAAT AAAGGCGGCG
GAAGGCAGAA ACCTGATTGC AGGTATTGAG AAACAACTGA ACGAACGGAG CTATGCCGCT
GCGGAGCAGG CCAGTCTGGC AGTAGTCGAA AAAGAAATAC AGGGACTAAA TTTTGATAAT
GCCGAATATA CCCGAAACCA GCAGAATCTG GCTGATTTGA CCCCTTTTGA AGAAAAGAAA
CGTAAACTTG ACGAAGCAAT TAACCGCCTG CCGCTGGAAA ATGACAGTCT AAAAAAGGCA
TCCTCTGCAC TGGCAGAGCT GACAGCCCGG CGTGATAATA AACTAAATGA ACAGCAGACC
CTGCTTAAAG AGCTGGCGGA ATTACCGGTG CTTGAAAAAG AACTGGGAGA AGCCGAAACT
GAATATAAGT CACTCAGTCA AAGGCAGGAT GCCCTGAGGC AACAACTGGG TTCACTCAGC
CAGAAAGCAG AACAGATAAA TGAGCTGGAG AAAAAGCTGA AAAAGCAAGC ACAGGAGAAA
GACCAAACTA CCCAAGAAAT AAATTATTTC GGTAAACTGG TCAGAGCTTT CGGCAAAAAA
GACGGAATCC AGACTATGCT TATTGAAGAC ACCCTGCCTG AACTGGAAAA CGGAGCTGAC
CTGTTGCTGT CGCGTATGAC TGACGGCCGC ATGCACCTTA GCATAGAAAC CCAGCGTTCC
ACCAAAAAGG GAGACCAAAC CGAAACTCTG GATATAAATA TCTCGGATGA ACTTGGCACC
CGCAACTATG AAACCTTTAG CGGCGGTGAG GCTTTCAGGA TAGATTTTGC GATCAGGATT
GCCCTGTCAC ACTTGCTGGC AAACCGTCTG GGCGCACCTT TGCGGACACT TATCATTGAT
GAGGGATTTG GCACACAGGA CACTACCGGC ATTGAGCGCC TTAAAGAGGC CATAAACTCT
ATTCAGAACG AGTTTGACAA GATACTGGTC ATAACCCATA TAGATGACCT GAAAGATTCA
TTCCCCACCC GCATTGAGAT AGACAAAACC CCATCCGGCT CAGCTATCCG CCTAAACTAA
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| Protein sequence | MIPVKLKIKN FMCYRGEIPP FSFNGIHTAC ICGQNGAGKS ALIDAITWAL WGKSRAKSDD
DVISLNEQEA EVSLDFEISG ELYQVIRQRQ RPKKAGTNGQ SLLSLFSLQD EKPRNITGDT
LTQTEKKIIS ILHMDYDTFI NSAFLRQGHA NQFTQQPPGK RKEVLANILG LEIYDQLEDL
ARQAVREAET KNLQIEQSIE DGKESLKSRP ELEEALNHTR QDLAEGEGKL KIQLAELEIM
RHKKHSFDTK QNTCRQLDND LKDISKDQSR WIQTLQEIKQ RISTFETLSA QKEAIFKGFQ
EYSVCQSLYD KHNRILAKLR QLENTKKPLE DAVYKEENNL KNTLGKYQER LKFRQDTAQT
LVILEKEKTQ SDQLKTRLET EEAELKIQQN KLLNLQSSLA RLETEHAVAV KEVNALEEKL
NLLAEAGENR CNCPLCETEL GQDKLKLVFG KYKTEQDTQK TLQADLQEKL SQMQSDIQAL
LKYIETETNR LSHSHKQYER QISLLDKGIA EAKEAEIKAA EGRNLIAGIE KQLNERSYAA
AEQASLAVVE KEIQGLNFDN AEYTRNQQNL ADLTPFEEKK RKLDEAINRL PLENDSLKKA
SSALAELTAR RDNKLNEQQT LLKELAELPV LEKELGEAET EYKSLSQRQD ALRQQLGSLS
QKAEQINELE KKLKKQAQEK DQTTQEINYF GKLVRAFGKK DGIQTMLIED TLPELENGAD
LLLSRMTDGR MHLSIETQRS TKKGDQTETL DINISDELGT RNYETFSGGE AFRIDFAIRI
ALSHLLANRL GAPLRTLIID EGFGTQDTTG IERLKEAINS IQNEFDKILV ITHIDDLKDS
FPTRIEIDKT PSGSAIRLN
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